fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G52880.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023950 not found in 413aa AT3G15510.1 1st_not 0.511201629 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G52880.1     ----MESTDSSGGP-PPPQ------PNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAII
Sb023950_Sorbi1 VMRSMESTDSSSGELPPPQKQPSSAPDLPPGFRFHPTDEELVVHYLKKKAASVPLPVAII
                    *******.*  ****      *:***************:****:** *********

AT1G52880.1     ADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIS
Sb023950_Sorbi1 AEVDLYKFDPWELPDKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMA
                *:************ **:***************************************:::

AT1G52880.1     TGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTD------NKPTHICDF-GNKKN
Sb023950_Sorbi1 S-GGNREKVGVKKALVFYRGKPPKGLKTNWIMHEYRLADAASSTTSRPPPPCNVGGGKAT
                : **. :*********** ******:*::********:*      .:*.  *:. *.* .

AT1G52880.1     SLRLDDWVLCRIYKKNNSTAS----------------------------------RHHHH
Sb023950_Sorbi1 SLRLDDWVLCRIYKKINKLGAGERSMDCEDSVEDAVAAYPTHAAAAMAAAVAGGGRAAHH
                *************** *. .:                                  *  **

AT1G52880.1     --------LHHIHLDNDHHRHDMMIDDDRFRHVPPGLHFPAIFSDNNDPTAIYDGGGGGY
Sb023950_Sorbi1 NGNSYTSLIHHHHEDN----------------------FLDGFMTAEDT---------GL
                        :** * **                      *   *   :*.         * 

AT1G52880.1     GGGSYSMNHCFASG-----SKQEQLFPPVMMMTSLN------------------------
Sb023950_Sorbi1 SAGASSLSQLAAAARAAAPADTKQLLVPSSSTTPFNWLDASALAILPPSKRFHGYNSGGT
                ..*: *:.:  *:.     :. :**: *    *.:*                        

AT1G52880.1     -QDSGIGSSSSPSKRFN---GGGV--GDCS-TSMAATPLMQNQGGI--------------
Sb023950_Sorbi1 STDGGGTSLSSPSERNNLAAAGAVDSGACSGGANAIVPTFLNPLGVQGATTYHHHAIFGT
                  *.*  * ****:* *   .*.*  * **  : * .* : *  *:              

AT1G52880.1     ---------------------YQLPGLNWYS
Sb023950_Sorbi1 PVTPEAAAAAATTATCGFQHPYQLSGVNWNP
                                     ***.*:** .
BoxShade v3.31 C (beta, 970507) Output
AT1G52880.1     - - - - M E S T D S S G G P - P P P Q - - - - - - P N L P P G F R F H P T D E E L V I H Y L K R K A D S V P L P V A I I
Sb023950_Sorbi1    V M R S M E S T D S S S G E L P P P Q K Q P S S A P D L P P G F R F H P T D E E L V V H Y L K K K A A S V P L P V A I I
 
AT1G52880.1     A D V D L Y K F D P W E L P A K A S F G E Q E W Y F F S P R D R K Y P N G A R P N R A A T S G Y W K A T G T D K P V I S
Sb023950_Sorbi1    A E V D L Y K F D P W E L P D K A T F G E Q E W Y F F S P R D R K Y P N G A R P N R A A T S G Y W K A T G T D K P I M A
 
AT1G52880.1     T G G G G S K K V G V K K A L V F Y S G K P P K G V K S D W I M H E Y R L T D - - - - - - N K P T H I C D F - G N K K N
Sb023950_Sorbi1    S - G G N R E K V G V K K A L V F Y R G K P P K G L K T N W I M H E Y R L A D A A S S T T S R P P P P C N V G G G K A T
 
AT1G52880.1     S L R L D D W V L C R I Y K K N N S T A S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R H H H H
Sb023950_Sorbi1    S L R L D D W V L C R I Y K K I N K L G A G E R S M D C E D S V E D A V A A Y P T H A A A A M A A A V A G G G R A A H H
 
AT1G52880.1     - - - - - - - - L H H I H L D N D H H R H D M M I D D D R F R H V P P G L H F P A I F S D N N D P T A I Y D G G G G G Y
Sb023950_Sorbi1    N G N S Y T S L I H H H H E D N - - - - - - - - - - - - - - - - - - - - - - F L D G F M T A E D T - - - - - - - - - G L
 
AT1G52880.1     G G G S Y S M N H C F A S G - - - - - S K Q E Q L F P P V M M M T S L N - - - - - - - - - - - - - - - - - - - - - - - -
Sb023950_Sorbi1    S A G A S S L S Q L A A A A R A A A P A D T K Q L L V P S S S T T P F N W L D A S A L A I L P P S K R F H G Y N S G G T
 
AT1G52880.1     - Q D S G I G S S S S P S K R F N - - - G G G V - - G D C S - T S M A A T P L M Q N Q G G I - - - - - - - - - - - - - -
Sb023950_Sorbi1    S T D G G G T S L S S P S E R N N L A A A G A V D S G A C S G G A N A I V P T F L N P L G V Q G A T T Y H H H A I F G T
 
AT1G52880.1     - - - - - - - - - - - - - - - - - - - - - Y Q L P G L N W Y S
Sb023950_Sorbi1    P V T P E A A A A A A T T A T C G F Q H P Y Q L S G V N W N P
 
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