fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G52880.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033756 not found in 360aa AT3G15510.1 1st_not 0.562118126 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G52880.1     MESTDSSGGPPPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPW
gm033756_Glyma1 MESTEDSSTSSQQQPNLPPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPW
                ****:.*. ..  ******************:****:*.*******:*************

AT1G52880.1     ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV
gm033756_Glyma1 ELPAKASFGAEEWYFFSPRERKYPNGARPNRAATSGYWKATGTDKPICS----GTQKVGV
                ********* :********:**************************: *    *::****

AT1G52880.1     KKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHI---CDFGNKKNSLRLDDWVLCRIYKK
gm033756_Glyma1 KKSLVFYGGKPPKGVKTDWIMHEYRVTENKPNNRPPGCDLGHKKNSLRLDDWVLCRIYKK
                **:****.********:********:*:***.:    **:*:******************

AT1G52880.1     NNSTASRHHHHLHHIHLDNDHHRHDMMIDDDRFRHVPPGL---HFPAIFSDNNDPTAIYD
gm033756_Glyma1 GNTQRS--------------HERDDSI--DDMIGEVPPSINVGHMSARFHLSRMSTS-YS
                .*:  *              *.*.* :  ** : .***.:   *:.* *  .. .*: *.

AT1G52880.1     G---------------GGGGYGGGSYSMN--------HCFASGSKQEQLFPPVMMMTSLN
gm033756_Glyma1 GALLENDRNTLEGVVIGNGSVNGISNTNNITSVISSSHQFGTSNSKAELLPFVPSNNTSN
                *               *.*. .* * : *        * *.:...: :*:* *   .: *

AT1G52880.1     QDSGIGSSS-----SPSKRFNGGGVGDCS-----------------------TSMAATPL
gm033756_Glyma1 SASKRTLSSLYWNVDDHKHFNLDSNGNVSVLRTDQENNNNNNGTSGSFATLLNQLPQTPS
                . *    **     .  *:** .. *: *                       ..:. ** 

AT1G52880.1     MQNQGGI----YQLPGLNWYS
gm033756_Glyma1 LPQIDGLLRTPYQIQGTNWYG
                : : .*:    **: * ***.
BoxShade v3.31 C (beta, 970507) Output
AT1G52880.1     M E S T D S S G G P P P P Q P N L P P G F R F H P T D E E L V I H Y L K R K A D S V P L P V A I I A D V D L Y K F D P W
gm033756_Glyma1    M E S T E D S S T S S Q Q Q P N L P P G F R F H P T D E E L V V H Y L K K K V D S V P L P V S I I A D V D L Y K F D P W
 
AT1G52880.1     E L P A K A S F G E Q E W Y F F S P R D R K Y P N G A R P N R A A T S G Y W K A T G T D K P V I S T G G G G S K K V G V
gm033756_Glyma1    E L P A K A S F G A E E W Y F F S P R E R K Y P N G A R P N R A A T S G Y W K A T G T D K P I C S - - - - G T Q K V G V
 
AT1G52880.1     K K A L V F Y S G K P P K G V K S D W I M H E Y R L T D N K P T H I - - - C D F G N K K N S L R L D D W V L C R I Y K K
gm033756_Glyma1    K K S L V F Y G G K P P K G V K T D W I M H E Y R V T E N K P N N R P P G C D L G H K K N S L R L D D W V L C R I Y K K
 
AT1G52880.1     N N S T A S R H H H H L H H I H L D N D H H R H D M M I D D D R F R H V P P G L - - - H F P A I F S D N N D P T A I Y D
gm033756_Glyma1    G N T Q R S - - - - - - - - - - - - - - H E R D D S I - - D D M I G E V P P S I N V G H M S A R F H L S R M S T S - Y S
 
AT1G52880.1     G - - - - - - - - - - - - - - - G G G G Y G G G S Y S M N - - - - - - - - H C F A S G S K Q E Q L F P P V M M M T S L N
gm033756_Glyma1    G A L L E N D R N T L E G V V I G N G S V N G I S N T N N I T S V I S S S H Q F G T S N S K A E L L P F V P S N N T S N
 
AT1G52880.1     Q D S G I G S S S - - - - - S P S K R F N G G G V G D C S - - - - - - - - - - - - - - - - - - - - - - - T S M A A T P L
gm033756_Glyma1    S A S K R T L S S L Y W N V D D H K H F N L D S N G N V S V L R T D Q E N N N N N N G T S G S F A T L L N Q L P Q T P S
 
AT1G52880.1     M Q N Q G G I - - - - Y Q L P G L N W Y S
gm033756_Glyma1    L P Q I D G L L R T P Y Q I Q G T N W Y G
 
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