fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G52890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034443 not found in 345aa AT3G15500.1 1st_not 0.534055727 II
Pt025675 not found in 342aa AT4G27410.2 1st_not 0.540247678 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G52890.1     MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP
gm034443_Glyma1 MGVPEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLP
pt025675_POPTR_ MGLQETDPLAQLSLPPGFRFHPTDEELLVQYLCKKVAGHHFSLQIIGEIDLYKFDPWFLP
                **: *.***:**********:******:*****:*.**:.*** :*.**********.**

AT1G52890.1     NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY
gm034443_Glyma1 SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY
pt025675_POPTR_ GKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY
                .**:**************************************:*:***::**********

AT1G52890.1     IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS-AQKQVYDNGIANAR
gm034443_Glyma1 IGKAPKGTKTNWIMHEYRLLDSSRKNTGTKLDDWVLCRIYKKNSS-AQKAV-QNGVVPSN
pt025675_POPTR_ VGKAPKGTKTNWIMHEYRLLESSRKSGSTKLDEWVLCRIYKKNSSAAQKSM-SS--VSSK
                :******************::.**:. .****:*********:** *** : ..  . :.

AT1G52890.1     EFS--NNGTSSTTSSSSHFEDVLDSFHQEIDNRNFQFSNPNRISSLRPDLTEQKTGFHGL
gm034443_Glyma1 EHTQYSNGSSS--SSSSQLDDVLESL-PAIDERCFPMP---RVNTLQQQQHEEKVNVQNL
pt025675_POPTR_ EYS--TNGSCS--SSSSHLEDVLDSL-TEIDDRLFALP---RTNSLKQMQHEEKINLANL
                *.:  .**:.*  ****:::***:*:   **:* * :.   * .:*:    *:* .. .*

AT1G52890.1     ADTSNFDWASFAGNVEHNNSVPELG----------MSHVVPNLEYN--------------
gm034443_Glyma1 GEGGLLDWTNPSV----LNSVVDFVSGNNNHNQLVQDQTQGMVNYN--ACNDLYVPT---
pt025675_POPTR_ GSGS-FDWATLAG----LNSLPELL------------QTQPGANYSNTNVNGVHVPSMPP
                .. . :**:. :      **: ::             :.    :*.              

AT1G52890.1     -C------GYLKT------EEEVESSH----GFNNSGELAQKG-----------YGVDSF
gm034443_Glyma1 LCH-------VGTSVPQKMEEEVQSGVRNQ-RVQNNSWFLQND--FTQGFQNS-VDTSGF
pt025675_POPTR_ LCHADSSTGRMGTSV----EEEVQSGVRTQLRDGNSGAFQQNSGVMTPNFSSTLLDPYEL
                 *        : *      ****:*.        *.. : *:.            .   :

AT1G52890.1     GYSGQV-GGFGFM-
gm034443_Glyma1 KYPVQP-VGFGFRN
pt025675_POPTR_ RYSTQPGSGYGFRQ
                 *. *   *:**
BoxShade v3.31 C (beta, 970507) Output
AT1G52890.1     M G I Q E T D P L T Q L S L P P G F R F Y P T D E E L M V Q Y L C R K A A G Y D F S L Q L I A E I D L Y K F D P W V L P
gm034443_Glyma1    M G V P E K D P L S Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G H H F S L P I I A E I D L Y K F D P W V L P
pt025675_POPTR_    M G L Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C K K V A G H H F S L Q I I G E I D L Y K F D P W F L P
 
AT1G52890.1     N K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I S T E G Q R V G I K K A L V F Y
gm034443_Glyma1    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T T E G R K V G I K K A L V F Y
pt025675_POPTR_    G K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I T T E G R K V G I K K A L V F Y
 
AT1G52890.1     I G K A P K G T K T N W I M H E Y R L I E P S R R N G S T K L D D W V L C R I Y K K Q S S - A Q K Q V Y D N G I A N A R
gm034443_Glyma1    I G K A P K G T K T N W I M H E Y R L L D S S R K N T G T K L D D W V L C R I Y K K N S S - A Q K A V - Q N G V V P S N
pt025675_POPTR_    V G K A P K G T K T N W I M H E Y R L L E S S R K S G S T K L D E W V L C R I Y K K N S S A A Q K S M - S S - - V S S K
 
AT1G52890.1     E F S - - N N G T S S T T S S S S H F E D V L D S F H Q E I D N R N F Q F S N P N R I S S L R P D L T E Q K T G F H G L
gm034443_Glyma1    E H T Q Y S N G S S S - - S S S S Q L D D V L E S L - P A I D E R C F P M P - - - R V N T L Q Q Q Q H E E K V N V Q N L
pt025675_POPTR_    E Y S - - T N G S C S - - S S S S H L E D V L D S L - T E I D D R L F A L P - - - R T N S L K Q M Q H E E K I N L A N L
 
AT1G52890.1     A D T S N F D W A S F A G N V E H N N S V P E L G - - - - - - - - - - M S H V V P N L E Y N - - - - - - - - - - - - - -
gm034443_Glyma1    G E G G L L D W T N P S V - - - - L N S V V D F V S G N N N H N Q L V Q D Q T Q G M V N Y N - - A C N D L Y V P T - - -
pt025675_POPTR_    G S G S - F D W A T L A G - - - - L N S L P E L L - - - - - - - - - - - - Q T Q P G A N Y S N T N V N G V H V P S M P P
 
AT1G52890.1     - C - - - - - - G Y L K T - - - - - - E E E V E S S H - - - - G F N N S G E L A Q K G - - - - - - - - - - - Y G V D S F
gm034443_Glyma1    L C H - - - - - - - V G T S V P Q K M E E E V Q S G V R N Q - R V Q N N S W F L Q N D - - F T Q G F Q N S - V D T S G F
pt025675_POPTR_    L C H A D S S T G R M G T S V - - - - E E E V Q S G V R T Q L R D G N S G A F Q Q N S G V M T P N F S S T L L D P Y E L
 
AT1G52890.1     G Y S G Q V - G G F G F M -
gm034443_Glyma1    K Y P V Q P - V G F G F R N
pt025675_POPTR_    R Y S T Q P G S G Y G F R Q
 
0