fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G52890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025675 not found in 342aa AT4G27410.2 1st_not 0.540247678 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G52890.1     MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP
pt025675_POPTR_ MGLQETDPLAQLSLPPGFRFHPTDEELLVQYLCKKVAGHHFSLQIIGEIDLYKFDPWFLP
                **:******:**********:******:*****:*.**:.****:*.**********.**

AT1G52890.1     NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY
pt025675_POPTR_ GKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY
                .**:**************************************:*:***::**********

AT1G52890.1     IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQKQVYDNGIANARE
pt025675_POPTR_ VGKAPKGTKTNWIMHEYRLLESSRKSGSTKLDEWVLCRIYKKNSSAAQKSMSS--VSSKE
                :******************:*.**:.******:*********:*** ::  ..  ..::*

AT1G52890.1     FSNNGTSSTTSSSSHFEDVLDSFHQEIDNRNFQFSNPNRISSLRPDLTEQKTGFHGLADT
pt025675_POPTR_ YSTNG--SCSSSSSHLEDVLDSL-TEIDDRLFALP---RTNSLKQMQHEEKINLANLGSG
                :*.**  * :*****:******:  ***:* * :.   * .**:    *:* .: .*.. 

AT1G52890.1     SNFDWASFAGNVEHNNSVPEL-----GMSHV--------VPNLEYNC------GYLKT--
pt025675_POPTR_ S-FDWATLAG----LNSLPELLQTQPGANYSNTNVNGVHVPSMPPLCHADSSTGRMGTSV
                * ****::**     **:***     * .:         **.:   *      * : *  

AT1G52890.1     EEEVESSHGF------NNSGELAQK-GYGVDSFG----------YSGQVG-GFGFM-
pt025675_POPTR_ EEEVQS--GVRTQLRDGNSGAFQQNSGVMTPNFSSTLLDPYELRYSTQPGSGYGFRQ
                ****:*  *.      .*** : *: *  . .*.          ** * * *:**
BoxShade v3.31 C (beta, 970507) Output
AT1G52890.1     M G I Q E T D P L T Q L S L P P G F R F Y P T D E E L M V Q Y L C R K A A G Y D F S L Q L I A E I D L Y K F D P W V L P
pt025675_POPTR_    M G L Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C K K V A G H H F S L Q I I G E I D L Y K F D P W F L P
 
AT1G52890.1     N K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I S T E G Q R V G I K K A L V F Y
pt025675_POPTR_    G K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I T T E G R K V G I K K A L V F Y
 
AT1G52890.1     I G K A P K G T K T N W I M H E Y R L I E P S R R N G S T K L D D W V L C R I Y K K Q S S A Q K Q V Y D N G I A N A R E
pt025675_POPTR_    V G K A P K G T K T N W I M H E Y R L L E S S R K S G S T K L D E W V L C R I Y K K N S S A A Q K S M S S - - V S S K E
 
AT1G52890.1     F S N N G T S S T T S S S S H F E D V L D S F H Q E I D N R N F Q F S N P N R I S S L R P D L T E Q K T G F H G L A D T
pt025675_POPTR_    Y S T N G - - S C S S S S S H L E D V L D S L - T E I D D R L F A L P - - - R T N S L K Q M Q H E E K I N L A N L G S G
 
AT1G52890.1     S N F D W A S F A G N V E H N N S V P E L - - - - - G M S H V - - - - - - - - V P N L E Y N C - - - - - - G Y L K T - -
pt025675_POPTR_    S - F D W A T L A G - - - - L N S L P E L L Q T Q P G A N Y S N T N V N G V H V P S M P P L C H A D S S T G R M G T S V
 
AT1G52890.1     E E E V E S S H G F - - - - - - N N S G E L A Q K - G Y G V D S F G - - - - - - - - - - Y S G Q V G - G F G F M -
pt025675_POPTR_    E E E V Q S - - G V R T Q L R D G N S G A F Q Q N S G V M T P N F S S T L L D P Y E L R Y S T Q P G S G Y G F R Q
 
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