fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G52890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031202 not found in 343aa AT4G27410.2 not_not 0.526315789 III
Pt012347 not found in 255aa AT4G27410.2 not_not 0.526315789 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G52890.1     MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP
pt012347_POPTR_ MGVQETDPLAQLSLPPGFRFHPTDEELLVQYLCRKVAGHHFSMQIIGEIDLYKFDPWLLP
pt031202_POPTR_ MGVQETDPLAQLSLPPGFRFHPTDEELLVQYLCRKVAGHHFSMQIIGEIDLYKFDPWLLP
                **:******:**********:******:*******.**:.**:*:*.**********:**

AT1G52890.1     NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY
pt012347_POPTR_ SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSDGRKVGIKKALVFY
pt031202_POPTR_ SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSDGRKVGIKKALVFY
                .**:****************************************:::*::**********

AT1G52890.1     IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQS-SAQKQVYDNGIANAR
pt012347_POPTR_ IGKAPKGTKTNWIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSM--SGVS-SK
pt031202_POPTR_ IGKAPKGTKTNWIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSM--SGVS-SK
                *********************.**::******:*********:* :***.:  .*:: ::

AT1G52890.1     EFSNNGTSSTTSSSSHF-EDVLDSFHQEIDNRNFQFSNPNRISSLRPDLTEQKTGFHGLA
pt012347_POPTR_ EPSTNSPSS--SFSSHFDDDVLDPL-PEIDDR---FLDLPRTNSLKPRHHEEKINLATLG
pt031202_POPTR_ EPSTNSPSS--SFSSHFDDDVLDPL-PEIDDR---FLDLPRTNSLKPRQHEEKINLATLG
                * *.*..**  * **** :****.:  ***:*   * :  * .**:*   *:* .:  *.

AT1G52890.1     DTSNFDWASFAGNVEHNNSVPELGMSHVV-------------PNLEYNCGYLKT------
pt012347_POPTR_ SGS-FDWATLAG----LNSVPQLVQTQPC-------------------------------
pt031202_POPTR_ SGS-FDWATLAG----LNSVPQLVQTQPCVSYSNSNVHDVYVPSMSQLC-HMDTSAERME
                . * ****::**     ****:*  ::                                 

AT1G52890.1     ---EEEVESS----------------------HGFNNSGELAQKGYGVDSFG--YSGQVG
pt012347_POPTR_ ------------------------------------------------------------
pt031202_POPTR_ NLVEEEVQSGVRTRLDSVGNPVFFQQNSSVRPQSFSNS---------FDPYGLRHSIQPG
                                                                            

AT1G52890.1     -GFGFM-
pt012347_POPTR_ -------
pt031202_POPTR_ SGFGFNQ
BoxShade v3.31 C (beta, 970507) Output
AT1G52890.1     M G I Q E T D P L T Q L S L P P G F R F Y P T D E E L M V Q Y L C R K A A G Y D F S L Q L I A E I D L Y K F D P W V L P
pt012347_POPTR_    M G V Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C R K V A G H H F S M Q I I G E I D L Y K F D P W L L P
pt031202_POPTR_    M G V Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C R K V A G H H F S M Q I I G E I D L Y K F D P W L L P
 
AT1G52890.1     N K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I S T E G Q R V G I K K A L V F Y
pt012347_POPTR_    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T S D G R K V G I K K A L V F Y
pt031202_POPTR_    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T S D G R K V G I K K A L V F Y
 
AT1G52890.1     I G K A P K G T K T N W I M H E Y R L I E P S R R N G S T K L D D W V L C R I Y K K Q S - S A Q K Q V Y D N G I A N A R
pt012347_POPTR_    I G K A P K G T K T N W I M H E Y R L I E S S R K H G S T K L D E W V L C R I Y K K K S I A A Q K S M - - S G V S - S K
pt031202_POPTR_    I G K A P K G T K T N W I M H E Y R L I E S S R K H G S T K L D E W V L C R I Y K K K S I A A Q K S M - - S G V S - S K
 
AT1G52890.1     E F S N N G T S S T T S S S S H F - E D V L D S F H Q E I D N R N F Q F S N P N R I S S L R P D L T E Q K T G F H G L A
pt012347_POPTR_    E P S T N S P S S - - S F S S H F D D D V L D P L - P E I D D R - - - F L D L P R T N S L K P R H H E E K I N L A T L G
pt031202_POPTR_    E P S T N S P S S - - S F S S H F D D D V L D P L - P E I D D R - - - F L D L P R T N S L K P R Q H E E K I N L A T L G
 
AT1G52890.1     D T S N F D W A S F A G N V E H N N S V P E L G M S H V V - - - - - - - - - - - - - P N L E Y N C G Y L K T - - - - - -
pt012347_POPTR_    S G S - F D W A T L A G - - - - L N S V P Q L V Q T Q P C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt031202_POPTR_    S G S - F D W A T L A G - - - - L N S V P Q L V Q T Q P C V S Y S N S N V H D V Y V P S M S Q L C - H M D T S A E R M E
 
AT1G52890.1     - - - E E E V E S S - - - - - - - - - - - - - - - - - - - - - - H G F N N S G E L A Q K G Y G V D S F G - - Y S G Q V G
pt012347_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt031202_POPTR_    N L V E E E V Q S G V R T R L D S V G N P V F F Q Q N S S V R P Q S F S N S - - - - - - - - - F D P Y G L R H S I Q P G
 
AT1G52890.1     - G F G F M -
pt012347_POPTR_    - - - - - - -
pt031202_POPTR_    S G F G F N Q
 
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