fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G52890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025675 not found in 342aa AT4G27410.2 1st_not 0.540247678 II
Pt031202 not found in 343aa AT4G27410.2 not_not 0.526315789 III
Pt012347 not found in 255aa AT4G27410.2 not_not 0.526315789 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G52890.1     MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP
pt012347_POPTR_ MGVQETDPLAQLSLPPGFRFHPTDEELLVQYLCRKVAGHHFSMQIIGEIDLYKFDPWLLP
pt025675_POPTR_ MGLQETDPLAQLSLPPGFRFHPTDEELLVQYLCKKVAGHHFSLQIIGEIDLYKFDPWFLP
pt031202_POPTR_ MGVQETDPLAQLSLPPGFRFHPTDEELLVQYLCRKVAGHHFSMQIIGEIDLYKFDPWLLP
                **:******:**********:******:*****:*.**:.**:*:*.**********.**

AT1G52890.1     NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY
pt012347_POPTR_ SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSDGRKVGIKKALVFY
pt025675_POPTR_ GKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY
pt031202_POPTR_ SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSDGRKVGIKKALVFY
                .**:**************************************:*:::*::**********

AT1G52890.1     IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQKQVYDNGIANARE
pt012347_POPTR_ IGKAPKGTKTNWIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSMSG--VSSKE
pt025675_POPTR_ VGKAPKGTKTNWIMHEYRLLESSRKSGSTKLDEWVLCRIYKKNSSAAQKSMSS--VSSKE
pt031202_POPTR_ IGKAPKGTKTNWIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSMSG--VSSKE
                :******************:*.**: ******:*********:* * ::  ..  ..::*

AT1G52890.1     FSNNGTSSTTSSSSHF-EDVLDSFHQEIDNRNFQFSNPNRISSLRPDLTEQKTGFHGLAD
pt012347_POPTR_ PSTNSPSS--SFSSHFDDDVLDPL-PEIDDRFLDLP---RTNSLKPRHHEEKINLATLGS
pt025675_POPTR_ YSTNGSCS--SSSSHL-EDVLDSL-TEIDDRLFALP---RTNSLKQMQHEEKINLANLGS
pt031202_POPTR_ PSTNSPSS--SFSSHFDDDVLDPL-PEIDDRFLDLP---RTNSLKPRQHEEKINLATLGS
                 *.*...*  * ***: :****.:  ***:* : :.   * .**:    *:* .:  *..

AT1G52890.1     TSNFDWASFAGNVEHNNSVPELGMSH-------------VVPNLEYNC------GYLKT-
pt012347_POPTR_ GS-FDWATLAG----LNSVPQLVQTQPC--------------------------------
pt025675_POPTR_ GS-FDWATLAG----LNSLPELLQTQPGANYSNTNVNGVHVPSMPPLCHADSSTGRMGTS
pt031202_POPTR_ GS-FDWATLAG----LNSVPQLVQTQPCVSYSNSNVHDVYVPSMSQLCHMDTSAERMENL
                 * ****::**     **:*:*  ::                                  

AT1G52890.1     -EEEVESS-----HGFNNSGELAQKGYGV----------DSFG--YSGQVG-GFGFM-
pt012347_POPTR_ ----------------------------------------------------------
pt025675_POPTR_ VEEEVQSGVRTQLRD-GNSGAF-QQNSGVMTPNFSSTLLDPYELRYSTQPGSGYGFRQ
pt031202_POPTR_ VEEEVQSGVRTRLDSVGNPVFF-QQNSSVRPQSFSNS-FDPYGLRHSIQPGSGFGFNQ
BoxShade v3.31 C (beta, 970507) Output
AT1G52890.1     M G I Q E T D P L T Q L S L P P G F R F Y P T D E E L M V Q Y L C R K A A G Y D F S L Q L I A E I D L Y K F D P W V L P
pt012347_POPTR_    M G V Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C R K V A G H H F S M Q I I G E I D L Y K F D P W L L P
pt025675_POPTR_    M G L Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C K K V A G H H F S L Q I I G E I D L Y K F D P W F L P
pt031202_POPTR_    M G V Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C R K V A G H H F S M Q I I G E I D L Y K F D P W L L P
 
AT1G52890.1     N K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I S T E G Q R V G I K K A L V F Y
pt012347_POPTR_    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T S D G R K V G I K K A L V F Y
pt025675_POPTR_    G K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I T T E G R K V G I K K A L V F Y
pt031202_POPTR_    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T S D G R K V G I K K A L V F Y
 
AT1G52890.1     I G K A P K G T K T N W I M H E Y R L I E P S R R N G S T K L D D W V L C R I Y K K Q S S A Q K Q V Y D N G I A N A R E
pt012347_POPTR_    I G K A P K G T K T N W I M H E Y R L I E S S R K H G S T K L D E W V L C R I Y K K K S I A A Q K S M S G - - V S S K E
pt025675_POPTR_    V G K A P K G T K T N W I M H E Y R L L E S S R K S G S T K L D E W V L C R I Y K K N S S A A Q K S M S S - - V S S K E
pt031202_POPTR_    I G K A P K G T K T N W I M H E Y R L I E S S R K H G S T K L D E W V L C R I Y K K K S I A A Q K S M S G - - V S S K E
 
AT1G52890.1     F S N N G T S S T T S S S S H F - E D V L D S F H Q E I D N R N F Q F S N P N R I S S L R P D L T E Q K T G F H G L A D
pt012347_POPTR_    P S T N S P S S - - S F S S H F D D D V L D P L - P E I D D R F L D L P - - - R T N S L K P R H H E E K I N L A T L G S
pt025675_POPTR_    Y S T N G S C S - - S S S S H L - E D V L D S L - T E I D D R L F A L P - - - R T N S L K Q M Q H E E K I N L A N L G S
pt031202_POPTR_    P S T N S P S S - - S F S S H F D D D V L D P L - P E I D D R F L D L P - - - R T N S L K P R Q H E E K I N L A T L G S
 
AT1G52890.1     T S N F D W A S F A G N V E H N N S V P E L G M S H - - - - - - - - - - - - - V V P N L E Y N C - - - - - - G Y L K T -
pt012347_POPTR_    G S - F D W A T L A G - - - - L N S V P Q L V Q T Q P C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt025675_POPTR_    G S - F D W A T L A G - - - - L N S L P E L L Q T Q P G A N Y S N T N V N G V H V P S M P P L C H A D S S T G R M G T S
pt031202_POPTR_    G S - F D W A T L A G - - - - L N S V P Q L V Q T Q P C V S Y S N S N V H D V Y V P S M S Q L C H M D T S A E R M E N L
 
AT1G52890.1     - E E E V E S S - - - - - H G F N N S G E L A Q K G Y G V - - - - - - - - - - D S F G - - Y S G Q V G - G F G F M -
pt012347_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt025675_POPTR_    V E E E V Q S G V R T Q L R D - G N S G A F - Q Q N S G V M T P N F S S T L L D P Y E L R Y S T Q P G S G Y G F R Q
pt031202_POPTR_    V E E E V Q S G V R T R L D S V G N P V F F - Q Q N S S V R P Q S F S N S - F D P Y G L R H S I Q P G S G F G F N Q
 
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