fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G52890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037471 not found in 343aa AT3G15500.1 not_not 0.529411764 III
Gm034444 not found in 307aa AT4G27410.2 not_not 0.521671826 III
Gm033758 not found in 340aa AT4G27410.2 not_not 0.510835913 III
Gm016178 not found in 337aa AT4G27410.2 not_not 0.489164086 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G52890.1     MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP
gm034444_Glyma1 MGVPEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLP
gm037471_Glyma1 MGVPEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLP
gm016178_Glyma0 MGVPERDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEVDLYKFDPWVLP
gm033758_Glyma1 MGVPERDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEVDLYKFDPWVLP
                **: * ***:*****************:*******.**:.*** :***:***********

AT1G52890.1     NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFY
gm034444_Glyma1 SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY
gm037471_Glyma1 SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY
gm016178_Glyma0 GKAVFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY
gm033758_Glyma1 GKAAFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFY
                .** ****************************************:***::**********

AT1G52890.1     IGKAPKGTKTNWIMHEYRLIEPSRR-NGST-KLDDWVLCRIYKKQSSAQKQVYDNGIANA
gm034444_Glyma1 IGKAPKGTKTNWIMHEYRLLDSSRK-NTGT-KLDDWVLCRIYKKNSSAQK-AVQNGVVPS
gm037471_Glyma1 VGKAPKGTKTNWIMHEYRLLDSSRK-NTGT-KLDDWVLCRIYKKNSSAQK-TAQNGVVPS
gm016178_Glyma0 IGKAPKGSKTNWIMHEYRLLDSSRKHNLGTAKLDDWVLCRIYKKNSSSQK-VEANFLA--
gm033758_Glyma1 VGKAPKGSKTNWIMHEYRLLDSSRKHNLGTAKLDDWVLCRIYKKNSSAQK-VEANLLA--
                :******:***********::.**: * .* *************:**:** .  * :.  

AT1G52890.1     REFSNNGTSSTTSSSSHFEDVLDSFHQEIDNRNFQFSNPNRISSLRPDLTEQKTGFHGLA
gm034444_Glyma1 NEHTQYSNGSSSSSSSQLDDVLESL-PAIDERCFPMPRVNTLQQQQHE--E---------
gm037471_Glyma1 NEHTQYSNGSSSSSSSQLEDVLESL-PSIDERCFAMPRVNTLQQQQHH--EEKVNVQNLG
gm016178_Glyma0 ---MECSNGSSPSSSSHVDDMLGSL-PEINDRCFTLPRVNSLRTMHQQ--DEKFGSPNMG
gm033758_Glyma1 ---MECSNGSSPSSSSHVDDMLESL-PEIDDRCFTLPRVNSVRTMQQQ--DEKFGFQNMG
                    : ...*:.****:.:*:* *:   *::* * :.. * :   : .  :         

AT1G52890.1     DTSNFDWA---------------------SFAGNVEHN--NS--VPEL---GMSHVVPNL
gm034444_Glyma1 ---------------------------KDQTQGMVNYNACNDLYVPTL-----CHV----
gm037471_Glyma1 AGGLMDWTNPSVLNSVADFASGNNQVVQDQTQGMVNYN-CNDLYVPTL-----CHL----
gm016178_Glyma0 SGFFSDWVNSTDLDSISEFESGC------QTQRMVNYD-CNDFFVPSLPPLG--HV----
gm033758_Glyma1 SGFFTDWVNPTDLDSVSEFGSGC------QTQGMVNYD-CNDLFVPSVPPFGHSHV----
                                             .    *:::  *.  ** :      *:    

AT1G52890.1     EYNCGYLKTEEEVES-------------------SHGFNNSGELAQKGYGVDSFGYS---
gm034444_Glyma1 GTSVPQ-KMEEEVQSGVRNQRV-QNNSWFLQNDFTQGFQNSV---------DTSGFKYPV
gm037471_Glyma1 DSSVPL-KMEEEVQSGVRNQRVGNNNSWFLQNDFTQGFQNSV---------DTCGFKYPV
gm016178_Glyma0 DYMVDA-PLEEEVQSGVRTRRV-DGPGHFQPNPDTRLLPGSG---------DPFGFGFIM
gm033758_Glyma1 NYMVGAPPSEEEVQSGVRTQQA-DGAACFQQNPNARLLPGSG---------DPFGFGFIM
                         ****:*                   :: : .*          *. *:    

AT1G52890.1     GQVGGFGFM-
gm034444_Glyma1 -QPVGFGFRN
gm037471_Glyma1 -QPVGFGFRN
gm016178_Glyma0 GQQVGFGVRE
gm033758_Glyma1 GQQVEFGFRD
                 *   **.
BoxShade v3.31 C (beta, 970507) Output
AT1G52890.1     M G I Q E T D P L T Q L S L P P G F R F Y P T D E E L M V Q Y L C R K A A G Y D F S L Q L I A E I D L Y K F D P W V L P
gm034444_Glyma1    M G V P E K D P L S Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G H H F S L P I I A E I D L Y K F D P W V L P
gm037471_Glyma1    M G V P E K D P L S Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G H H F S L P I I A E I D L Y K F D P W V L P
gm016178_Glyma0    M G V P E R D P L A Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G H H F S L P I I A E V D L Y K F D P W V L P
gm033758_Glyma1    M G V P E R D P L A Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G H H F S L P I I A E V D L Y K F D P W V L P
 
AT1G52890.1     N K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I S T E G Q R V G I K K A L V F Y
gm034444_Glyma1    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T T E G R K V G I K K A L V F Y
gm037471_Glyma1    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T T E G R K V G I K K A L V F Y
gm016178_Glyma0    G K A V F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T T E G R K V G I K K A L V F Y
gm033758_Glyma1    G K A A F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T T E G R K V G I K K A L V F Y
 
AT1G52890.1     I G K A P K G T K T N W I M H E Y R L I E P S R R - N G S T - K L D D W V L C R I Y K K Q S S A Q K Q V Y D N G I A N A
gm034444_Glyma1    I G K A P K G T K T N W I M H E Y R L L D S S R K - N T G T - K L D D W V L C R I Y K K N S S A Q K - A V Q N G V V P S
gm037471_Glyma1    V G K A P K G T K T N W I M H E Y R L L D S S R K - N T G T - K L D D W V L C R I Y K K N S S A Q K - T A Q N G V V P S
gm016178_Glyma0    I G K A P K G S K T N W I M H E Y R L L D S S R K H N L G T A K L D D W V L C R I Y K K N S S S Q K - V E A N F L A - -
gm033758_Glyma1    V G K A P K G S K T N W I M H E Y R L L D S S R K H N L G T A K L D D W V L C R I Y K K N S S A Q K - V E A N L L A - -
 
AT1G52890.1     R E F S N N G T S S T T S S S S H F E D V L D S F H Q E I D N R N F Q F S N P N R I S S L R P D L T E Q K T G F H G L A
gm034444_Glyma1    N E H T Q Y S N G S S S S S S S Q L D D V L E S L - P A I D E R C F P M P R V N T L Q Q Q Q H E - - E - - - - - - - - -
gm037471_Glyma1    N E H T Q Y S N G S S S S S S S Q L E D V L E S L - P S I D E R C F A M P R V N T L Q Q Q Q H H - - E E K V N V Q N L G
gm016178_Glyma0    - - - M E C S N G S S P S S S S H V D D M L G S L - P E I N D R C F T L P R V N S L R T M H Q Q - - D E K F G S P N M G
gm033758_Glyma1    - - - M E C S N G S S P S S S S H V D D M L E S L - P E I D D R C F T L P R V N S V R T M Q Q Q - - D E K F G F Q N M G
 
AT1G52890.1     D T S N F D W A - - - - - - - - - - - - - - - - - - - - - S F A G N V E H N - - N S - - V P E L - - - G M S H V V P N L
gm034444_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - K D Q T Q G M V N Y N A C N D L Y V P T L - - - - - C H V - - - -
gm037471_Glyma1    A G G L M D W T N P S V L N S V A D F A S G N N Q V V Q D Q T Q G M V N Y N - C N D L Y V P T L - - - - - C H L - - - -
gm016178_Glyma0    S G F F S D W V N S T D L D S I S E F E S G C - - - - - - Q T Q R M V N Y D - C N D F F V P S L P P L G - - H V - - - -
gm033758_Glyma1    S G F F T D W V N P T D L D S V S E F G S G C - - - - - - Q T Q G M V N Y D - C N D L F V P S V P P F G H S H V - - - -
 
AT1G52890.1     E Y N C G Y L K T E E E V E S - - - - - - - - - - - - - - - - - - - S H G F N N S G E L A Q K G Y G V D S F G Y S - - -
gm034444_Glyma1    G T S V P Q - K M E E E V Q S G V R N Q R V - Q N N S W F L Q N D F T Q G F Q N S V - - - - - - - - - D T S G F K Y P V
gm037471_Glyma1    D S S V P L - K M E E E V Q S G V R N Q R V G N N N S W F L Q N D F T Q G F Q N S V - - - - - - - - - D T C G F K Y P V
gm016178_Glyma0    D Y M V D A - P L E E E V Q S G V R T R R V - D G P G H F Q P N P D T R L L P G S G - - - - - - - - - D P F G F G F I M
gm033758_Glyma1    N Y M V G A P P S E E E V Q S G V R T Q Q A - D G A A C F Q Q N P N A R L L P G S G - - - - - - - - - D P F G F G F I M
 
AT1G52890.1     G Q V G G F G F M -
gm034444_Glyma1    - Q P V G F G F R N
gm037471_Glyma1    - Q P V G F G F R N
gm016178_Glyma0    G Q Q V G F G V R E
gm033758_Glyma1    G Q Q V E F G F R D
 
0