fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp036022 RSRGADLGLQLDIRAA in 120/1049 AT3G60030.1 1st_not 0.504098360 II
LQRPSIDLQQPLPSEQCS in 588/1049
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G53160.1     ---------MEG-------------------KRSQGQGYMKKKSYLVEEDMETDT-----
pp036022_Pp1s34 MERHVGQISVEGLPFIQHQFFPGGGGIPQLHPNGRGVSAVDRSSELPWSTGQTGSNWNYC
                         :**                    ..:* . :.:.* *  .  :*.:     

AT1G53160.1     ----DEEEEVGRD-------RVRG-------------------------------SRGS-
pp036022_Pp1s34 GLSDNAERAIHRDDWNANSWRLDGYTLNAQRVSRAPDGTGSESSKNLTSGENEHRSRGAD
                    : *. : **       *: *                               ***: 

AT1G53160.1     -------------------------------------------------INRGG------
pp036022_Pp1s34 LGLQLDIRAAGTPEANHPVIHIDDDESEVQGQSLFGRHTPSPPSNEPNPYNRGNDSPEDD
                                                                  ***.      

AT1G53160.1     ---SLRL---------------------------CQVDRCTADMKEAKLYHRRHKVCEVH
pp036022_Pp1s34 GPLSLKLGGSSYAYVENGAGKRPRSSSPPSQIPTCQVDGCTADLSKAKDYHRRHKVCETH
                   **:*                           **** ****:.:** *********.*

AT1G53160.1     AKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSS----------
pp036022_Pp1s34 SKASTAQVSRVTQRFCQQCSRFHALDQFDEGKRSCRRRLAGHNKRRRKTQPDAPAPRVED
                :***:. :* :.*********** *::***.************:****:.          

AT1G53160.1     ------------------------------------------------------------
pp036022_Pp1s34 QAGVNNTDIMTLLGLLSQLKGPLDQASAATSERDILLQCLRQAGNLNLPNSSLEGLSRAP
                                                                            

AT1G53160.1     ------------------------------------------------------------
pp036022_Pp1s34 PSWSQLTRNSDPAQPPIDPRLLAAQLAAHAPPATLPQQDAITMLLQNNLKQAARIAQENM
                                                                            

AT1G53160.1     -----------------------GESTYG-------------------------------
pp036022_Pp1s34 YNRVGFNGNMNGVPSPYAALNADASASYGVPQVNNERTSSAAGFSLPLSVRVPGSVPGNV
                                       ..::**                               

AT1G53160.1     ------------------------------EGSG------RRG-----------------
pp036022_Pp1s34 VPAQLLASVALSLQQSLAAQTASQDNHLAANGYGTSLPTAHRGNPDQSPVDTRNFPHQRF
                                              :* *      :**                 

AT1G53160.1     ---------INGQVVMQNQ------------------------ERSRVEMTLPMPN----
pp036022_Pp1s34 ARHEDNDATVHSQVGMQRQASQSGASHFHKRPFLESQKSQPPLQRPSIDLQQPLPSEQCS
                         ::.** **.*                        :*. :::  *:*.    

AT1G53160.1     ------------------------------------------------------------
pp036022_Pp1s34 DTSETGSGSGSGSGSGSGSGSGHQSPGTPNRESEINEWLSHRPTDMEGFIRPGCIILTIF
                                                                            

AT1G53160.1     ------------------------------------------------------------
pp036022_Pp1s34 LSMPKFAWAEVDQDSLVGNWKPVIVADKPVAAEICTLEDEIEMAAGFAEIRAKQYGLDPS
                                                                            

AT1G53160.1     ------------------------------------------------------------
pp036022_Pp1s34 LVLYCTALARLAEEEDVTQFLNELGWFFQRSYYGNLNFSLPTTQASFTKLEQLLVFSVER
                                                                            

AT1G53160.1     ------------------------------------------------------------
pp036022_Pp1s34 NWCAVVRKLLDIAFETGDWEATFMVLSEMSQEGSSLLHRAVRNKKRPMVELLLGFAPSFL
                                                                            

AT1G53160.1     --------SSFKR-------------PQIR------------------------------
pp036022_Pp1s34 AGINDSDVESFKRKLEFRLKWSSIYKPDMRGPGGLTPLHIAASIHGAEDIVDALTTGPSQ
                        .****             *::*                              

AT1G53160.1     ------------------------------------------------------------
pp036022_Pp1s34 DALHAWLHKKDDSGATPLDLAKAGGNMKSVQVVRAKLAKIENPDSIAIDIAAGWDHRRAE
                                                                            

AT1G53160.1     ------------------------------------------------------------
pp036022_Pp1s34 SIVQAMELSQRRASEGIGATRSDETPVCREVDFARLPRDVCGVKGAMYRPFLVSIMGIAC
                                                                            

AT1G53160.1     -----------------------------
pp036022_Pp1s34 ICVCVCLLLRGPQNVLPLFTWSGLEQGKE
BoxShade v3.31 C (beta, 970507) Output
AT1G53160.1     - - - - - - - - - M E G - - - - - - - - - - - - - - - - - - - K R S Q G Q G Y M K K K S Y L V E E D M E T D T - - - - -
pp036022_Pp1s34    M E R H V G Q I S V E G L P F I Q H Q F F P G G G G I P Q L H P N G R G V S A V D R S S E L P W S T G Q T G S N W N Y C
 
AT1G53160.1     - - - - D E E E E V G R D - - - - - - - R V R G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S R G S -
pp036022_Pp1s34    G L S D N A E R A I H R D D W N A N S W R L D G Y T L N A Q R V S R A P D G T G S E S S K N L T S G E N E H R S R G A D
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I N R G G - - - - - -
pp036022_Pp1s34    L G L Q L D I R A A G T P E A N H P V I H I D D D E S E V Q G Q S L F G R H T P S P P S N E P N P Y N R G N D S P E D D
 
AT1G53160.1     - - - S L R L - - - - - - - - - - - - - - - - - - - - - - - - - - - C Q V D R C T A D M K E A K L Y H R R H K V C E V H
pp036022_Pp1s34    G P L S L K L G G S S Y A Y V E N G A G K R P R S S S P P S Q I P T C Q V D G C T A D L S K A K D Y H R R H K V C E T H
 
AT1G53160.1     A K A S S V F L S G L N Q R F C Q Q C S R F H D L Q E F D E A K R S C R R R L A G H N E R R R K S S - - - - - - - - - -
pp036022_Pp1s34    S K A S T A Q V S R V T Q R F C Q Q C S R F H A L D Q F D E G K R S C R R R L A G H N K R R R K T Q P D A P A P R V E D
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    Q A G V N N T D I M T L L G L L S Q L K G P L D Q A S A A T S E R D I L L Q C L R Q A G N L N L P N S S L E G L S R A P
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    P S W S Q L T R N S D P A Q P P I D P R L L A A Q L A A H A P P A T L P Q Q D A I T M L L Q N N L K Q A A R I A Q E N M
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - G E S T Y G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    Y N R V G F N G N M N G V P S P Y A A L N A D A S A S Y G V P Q V N N E R T S S A A G F S L P L S V R V P G S V P G N V
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E G S G - - - - - - R R G - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    V P A Q L L A S V A L S L Q Q S L A A Q T A S Q D N H L A A N G Y G T S L P T A H R G N P D Q S P V D T R N F P H Q R F
 
AT1G53160.1     - - - - - - - - - I N G Q V V M Q N Q - - - - - - - - - - - - - - - - - - - - - - - - E R S R V E M T L P M P N - - - -
pp036022_Pp1s34    A R H E D N D A T V H S Q V G M Q R Q A S Q S G A S H F H K R P F L E S Q K S Q P P L Q R P S I D L Q Q P L P S E Q C S
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    D T S E T G S G S G S G S G S G S G S G S G H Q S P G T P N R E S E I N E W L S H R P T D M E G F I R P G C I I L T I F
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    L S M P K F A W A E V D Q D S L V G N W K P V I V A D K P V A A E I C T L E D E I E M A A G F A E I R A K Q Y G L D P S
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    L V L Y C T A L A R L A E E E D V T Q F L N E L G W F F Q R S Y Y G N L N F S L P T T Q A S F T K L E Q L L V F S V E R
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    N W C A V V R K L L D I A F E T G D W E A T F M V L S E M S Q E G S S L L H R A V R N K K R P M V E L L L G F A P S F L
 
AT1G53160.1     - - - - - - - - S S F K R - - - - - - - - - - - - - P Q I R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    A G I N D S D V E S F K R K L E F R L K W S S I Y K P D M R G P G G L T P L H I A A S I H G A E D I V D A L T T G P S Q
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    D A L H A W L H K K D D S G A T P L D L A K A G G N M K S V Q V V R A K L A K I E N P D S I A I D I A A G W D H R R A E
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    S I V Q A M E L S Q R R A S E G I G A T R S D E T P V C R E V D F A R L P R D V C G V K G A M Y R P F L V S I M G I A C
 
AT1G53160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp036022_Pp1s34    I C V C V C L L L R G P Q N V L P L F T W S G L E Q G K E
 
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