fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025879 not found in 193aa AT3G15270.1 1st_not 0.569672131 II
Pt031248 not found in 196aa AT1G53160.1 not_1st 0.557377049 II
Pt020564 not found in 148aa AT1G53160.1 not_1st 0.540983606 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G53160.1     -----MEGKRS-QGQGYMKKKSYLVEEDMETDTDEEEEVGR-------DRVR------GS
pt020564_POPTR_ MGTSKAEGKRN-LKE---------IEDEEEDDDEEDIYTGL--GFGDDDKIKKK----GR
pt025879_POPTR_ MDAKTLEGKRNYLKEKMINKDDFPIEDDLEDDMEEDEGGGGCFGFTDDEKKKGV----GK
pt031248_POPTR_ MDARTLEGKHSSLKEKMINKDDFLIEDELEDDMEEYESGGGV-GLADDEKKKGAGVMHGK
                      ***:.   :         :*:: * * :*    *        :: :      * 

AT1G53160.1     RGSINRGGSLR-------LCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRF
pt020564_POPTR_ TGSGCGGGGGRSSSSPPISCQVKNCTTDMTDAKRYHKRHKVCEFHAKASSVLVNGVEQRF
pt025879_POPTR_ RGTGGGG------ASPP-SCQVEKCGANLTDAKRYHRRHKVCEVHAKSPAVVVAGLRQRF
pt031248_POPTR_ RGTGSGG------ASPP-SCQVEKCGANLTDAKRYHRRHKVCEVHAKSPAVVVAGLRQRF
                 *:   *            ***..* :::.:** **:******.***:.:*.: *:.***

AT1G53160.1     CQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYGEGSGRRGINGQV----VMQ
pt020564_POPTR_ CQQCSRFHDLSEFDDSKRSCRRRLAGHNERRRKSSSDN-QGEGSN---------------
pt025879_POPTR_ CQQCSRFHELLEFDETKRSCRRRLAGHNERRRKNTAES-YGEGSSRKGVGTQLKESPCRQ
pt031248_POPTR_ CQQCSRFHELVEFDETKRSCRRRLAGHNERRRKSTAES-YGEGSNRKGVNTPLKENPCRQ
                ********:* ***::*****************.:.:.  ****.               

AT1G53160.1     NQERSRVEMTLP-MPNSSFKRPQIR
pt020564_POPTR_ -------------------------
pt025879_POPTR_ ADERGRYQMSIPSQGSSSYKRSQIR
pt031248_POPTR_ ADERGRFQINIPPQGSSSYKRSQIR
BoxShade v3.31 C (beta, 970507) Output
AT1G53160.1     - - - - - M E G K R S - Q G Q G Y M K K K S Y L V E E D M E T D T D E E E E V G R - - - - - - - D R V R - - - - - - G S
pt020564_POPTR_    M G T S K A E G K R N - L K E - - - - - - - - - I E D E E E D D D E E D I Y T G L - - G F G D D D K I K K K - - - - G R
pt025879_POPTR_    M D A K T L E G K R N Y L K E K M I N K D D F P I E D D L E D D M E E D E G G G G C F G F T D D E K K K G V - - - - G K
pt031248_POPTR_    M D A R T L E G K H S S L K E K M I N K D D F L I E D E L E D D M E E Y E S G G G V - G L A D D E K K K G A G V M H G K
 
AT1G53160.1     R G S I N R G G S L R - - - - - - - L C Q V D R C T A D M K E A K L Y H R R H K V C E V H A K A S S V F L S G L N Q R F
pt020564_POPTR_    T G S G C G G G G G R S S S S P P I S C Q V K N C T T D M T D A K R Y H K R H K V C E F H A K A S S V L V N G V E Q R F
pt025879_POPTR_    R G T G G G G - - - - - - A S P P - S C Q V E K C G A N L T D A K R Y H R R H K V C E V H A K S P A V V V A G L R Q R F
pt031248_POPTR_    R G T G S G G - - - - - - A S P P - S C Q V E K C G A N L T D A K R Y H R R H K V C E V H A K S P A V V V A G L R Q R F
 
AT1G53160.1     C Q Q C S R F H D L Q E F D E A K R S C R R R L A G H N E R R R K S S G E S T Y G E G S G R R G I N G Q V - - - - V M Q
pt020564_POPTR_    C Q Q C S R F H D L S E F D D S K R S C R R R L A G H N E R R R K S S S D N - Q G E G S N - - - - - - - - - - - - - - -
pt025879_POPTR_    C Q Q C S R F H E L L E F D E T K R S C R R R L A G H N E R R R K N T A E S - Y G E G S S R K G V G T Q L K E S P C R Q
pt031248_POPTR_    C Q Q C S R F H E L V E F D E T K R S C R R R L A G H N E R R R K S T A E S - Y G E G S N R K G V N T P L K E N P C R Q
 
AT1G53160.1     N Q E R S R V E M T L P - M P N S S F K R P Q I R
pt020564_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - -
pt025879_POPTR_    A D E R G R Y Q M S I P S Q G S S S Y K R S Q I R
pt031248_POPTR_    A D E R G R F Q I N I P P Q G S S S Y K R S Q I R
 
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