fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os028209 not found in 216aa AT1G53160.1 1st_1st 0.495901639 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G53160.1     MEGKRSQGQGYMKKKSYL-----------------------VEEDME-------------
Os028209_Os07t0 MDRKDKARKNFSSSSSSSAASMAALAAAAAAGDGGAALPSPMEEDKKPRLVASSLAPVAG
                *: * .  :.: ...*                         :*** :             

AT1G53160.1     ----------------TDTDEEEEVGRDRVRGS----RGSINRGGSLRLCQVDRCTADMK
Os028209_Os07t0 GGGGGSSSSAAVAAGASSSSSSSSVAAAARRGAGRAGGGAPSGGGGGPRCQVERCGVDLS
                                :.:.....*.    **:     *: . **.   ***:** .*:.

AT1G53160.1     EAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNER
Os028209_Os07t0 EAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRSCRRRLAGHNER
                **  *:******:.*:* . *:::**.***********:* ***:***************

AT1G53160.1     RRKSSGESTYGEGSGRRGINGQVVMQNQERSRVEMTLPMPNSSFKRP-QIR
Os028209_Os07t0 RRKSAADTAHGE-------NCRHADQDAGRSHQGTGNP--------PFQIR
                ****:.::::**       * : . *:  **:     *        * ***
BoxShade v3.31 C (beta, 970507) Output
AT1G53160.1     M E G K R S Q G Q G Y M K K K S Y L - - - - - - - - - - - - - - - - - - - - - - - V E E D M E - - - - - - - - - - - - -
Os028209_Os07t0    M D R K D K A R K N F S S S S S S S A A S M A A L A A A A A A G D G G A A L P S P M E E D K K P R L V A S S L A P V A G
 
AT1G53160.1     - - - - - - - - - - - - - - - - T D T D E E E E V G R D R V R G S - - - - R G S I N R G G S L R L C Q V D R C T A D M K
Os028209_Os07t0    G G G G G S S S S A A V A A G A S S S S S S S S V A A A A R R G A G R A G G G A P S G G G G G P R C Q V E R C G V D L S
 
AT1G53160.1     E A K L Y H R R H K V C E V H A K A S S V F L S G L N Q R F C Q Q C S R F H D L Q E F D E A K R S C R R R L A G H N E R
Os028209_Os07t0    E A G R Y N R R H K V C Q T H S K E P V V L V A G L R Q R F C Q Q C S R F H E L T E F D D A K R S C R R R L A G H N E R
 
AT1G53160.1     R R K S S G E S T Y G E G S G R R G I N G Q V V M Q N Q E R S R V E M T L P M P N S S F K R P - Q I R
Os028209_Os07t0    R R K S A A D T A H G E - - - - - - - N C R H A D Q D A G R S H Q G T G N P - - - - - - - - P F Q I R
 
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