fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm018912 not found in 146aa AT2G33810.1 1st_not 0.536885245 II
Gm033819 not found in 185aa AT1G53160.1 not_1st 0.528688524 II
Gm016104 not found in 173aa AT1G53160.1 not_1st 0.512295081 II
Gm037624 not found in 158aa AT1G53160.1 not_1st 0.450819672 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G53160.1     -----------MEGKRSQGQGYMKKK------------SYLVEEDMETDTDEEEE-----
gm037624_Glyma1 ---------MVVRSDRLKR-------------------DVADCGDNNQNGYVEQE-----
gm033819_Glyma1 MDIRVFGSVIEMEGRRVERKKTLFER----------------EEDESGVNITEEE-KKIG
gm018912_Glyma0 -----------MDTSRYEGKRVLRYK----------------EEDENDDDEEEEEVSEVG
gm016104_Glyma0 ----------------MERERALFERVRKNSTVEEEVENEVEEEDESGVSITEEE-KKKG
                                 :                          * .     *:*     

AT1G53160.1     VGRDRV-------------RGSRGSINRGGSL-RLCQVDRCT---ADMKEAKLYHRRHKV
gm037624_Glyma1 -------------------KKIKG-------------VHICGVVNADLHEAKQYHRRHRV
gm033819_Glyma1 VSSG------------GGRRGSSGG--GGGVSPPSCQAERCG---ADLTDAKRYHRRHKV
gm018912_Glyma0 FGADRRRNKRVMRDLHGKRSGSKG----GGSMPPSCQVDNCD---ADLSEAKQYHRRHKV
gm016104_Glyma0 VGSS------------GGRRGSSG--------------ERCG---ADLTDAKRYHRRHKV
                                       *              . *    **: :** *****:*

AT1G53160.1     CEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESTYG
gm037624_Glyma1 CEYHVKAQVVLVDEVRQRFCQQCSRFHELAEFDDTKRSCRSSLAGHNERRRKNSDQS-QA
gm033819_Glyma1 CEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDESKRSCRRRLAGHNERRRKTNPEA-AN
gm018912_Glyma0 CEYHAKAPSVHMAGLQQRFCQQCSRFHELSEFDDSKRSCRTRLAGHNERRRKNAVDY-HG
gm016104_Glyma0 CEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDESKRSCRRRLAGHNERRRKSNPEA-SN
                ** * **  * :  :.***********:* ***::*****  **********.  :    

AT1G53160.1     EGSGRRGINGQVVMQN------QERSRVEMTLPMPNSSFKRPQIR
gm037624_Glyma1 EGSSRNKGTGHPQLKDITCGQADERGRIQITIH-ENAAYKHFQIR
gm033819_Glyma1 EGNSK----GQHPKETTHCRLADERGRIQMNLT-GSSEYKSFNIR
gm018912_Glyma0 E--------------------------------------------
gm016104_Glyma0 EGSTK----GHHPKETTHCRLANERERIQMNLP-GSSGYKSFNIR
                *
BoxShade v3.31 C (beta, 970507) Output
AT1G53160.1     - - - - - - - - - - - M E G K R S Q G Q G Y M K K K - - - - - - - - - - - - S Y L V E E D M E T D T D E E E E - - - - -
gm037624_Glyma1    - - - - - - - - - M V V R S D R L K R - - - - - - - - - - - - - - - - - - - D V A D C G D N N Q N G Y V E Q E - - - - -
gm033819_Glyma1    M D I R V F G S V I E M E G R R V E R K K T L F E R - - - - - - - - - - - - - - - - E E D E S G V N I T E E E - K K I G
gm018912_Glyma0    - - - - - - - - - - - M D T S R Y E G K R V L R Y K - - - - - - - - - - - - - - - - E E D E N D D D E E E E E V S E V G
gm016104_Glyma0    - - - - - - - - - - - - - - - - M E R E R A L F E R V R K N S T V E E E V E N E V E E E D E S G V S I T E E E - K K K G
 
AT1G53160.1     V G R D R V - - - - - - - - - - - - - R G S R G S I N R G G S L - R L C Q V D R C T - - - A D M K E A K L Y H R R H K V
gm037624_Glyma1    - - - - - - - - - - - - - - - - - - - K K I K G - - - - - - - - - - - - - V H I C G V V N A D L H E A K Q Y H R R H R V
gm033819_Glyma1    V S S G - - - - - - - - - - - - G G R R G S S G G - - G G G V S P P S C Q A E R C G - - - A D L T D A K R Y H R R H K V
gm018912_Glyma0    F G A D R R R N K R V M R D L H G K R S G S K G - - - - G G S M P P S C Q V D N C D - - - A D L S E A K Q Y H R R H K V
gm016104_Glyma0    V G S S - - - - - - - - - - - - G G R R G S S G - - - - - - - - - - - - - - E R C G - - - A D L T D A K R Y H R R H K V
 
AT1G53160.1     C E V H A K A S S V F L S G L N Q R F C Q Q C S R F H D L Q E F D E A K R S C R R R L A G H N E R R R K S S G E S T Y G
gm037624_Glyma1    C E Y H V K A Q V V L V D E V R Q R F C Q Q C S R F H E L A E F D D T K R S C R S S L A G H N E R R R K N S D Q S - Q A
gm033819_Glyma1    C E F H S K A P V V V V A G L R Q R F C Q Q C S R F H D L A E F D E S K R S C R R R L A G H N E R R R K T N P E A - A N
gm018912_Glyma0    C E Y H A K A P S V H M A G L Q Q R F C Q Q C S R F H E L S E F D D S K R S C R T R L A G H N E R R R K N A V D Y - H G
gm016104_Glyma0    C E F H S K A P V V V V A G L R Q R F C Q Q C S R F H D L A E F D E S K R S C R R R L A G H N E R R R K S N P E A - S N
 
AT1G53160.1     E G S G R R G I N G Q V V M Q N - - - - - - Q E R S R V E M T L P M P N S S F K R P Q I R
gm037624_Glyma1    E G S S R N K G T G H P Q L K D I T C G Q A D E R G R I Q I T I H - E N A A Y K H F Q I R
gm033819_Glyma1    E G N S K - - - - G Q H P K E T T H C R L A D E R G R I Q M N L T - G S S E Y K S F N I R
gm018912_Glyma0    E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm016104_Glyma0    E G S T K - - - - G H H P K E T T H C R L A N E R E R I Q M N L P - G S S G Y K S F N I R
 
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