fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033704 DLGQQDLRLSLQSFQD in 203/371 AT1G53230.1 1st_1st 0.448476052 Ia
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CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G53230.1     MAPDNDHFLDSPSPPLLEMRHHQSATEN-------GGGCGEIVEVQGGHIVRSTGRKDRH
gm033704_Glyma1 --------MGEPQHP---HQHHQQAAATPSRAAMRGGGGGEIVEVQGGHIVRSTGRKDRH
                        :..*. *    :***.*: .       *** *********************

AT1G53230.1     SKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQLPPW
gm033704_Glyma1 SKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDQLAELPPW
                ****************:* *************:***********.***:***:**:****

AT1G53230.1     NPADTLRQH--------AAAAANAKPRKTKTLISPPPPQPEETEHH--RIGEEEDNESSF
gm033704_Glyma1 NPTATPMQPPSQEIPSVAAARAPLSPRLLEI-------QNNSLTHNSSSISIKYNSGSGF
                **: *  *         *** *  .**  :        * :.  *:   *. : :. *.*

AT1G53230.1     LPASMDSDSIADTIKSFFPVASTQQSYHHQPPSRGNTQNQDLLRLSLQSFQNGPPFPNQT
gm033704_Glyma1 LPASLDTDNIAETIKTFFPVEATTTSFQSYPPAPPDLGQQD-LRLSLQSFQDPIMLHHQP
                ****:*:*.**:***:**** :*  *::  **:  :  :** *********:   : :*.

AT1G53230.1     ----EPALFSGQSNNQLAFDSSTASW----EQSHQSPEFGKIQRLVSWNNVGAAESAGST
gm033704_Glyma1 QSHHEPVLFAGTAAAALGFDGGYG-WSEHQHQNHHSEE----QRLLY-----AGGNSGHG
                    **.**:* :   *.**.. . *    .*.*:* *    ***:      *. .:*  

AT1G53230.1     GGFVFASPSSLHPVYSQSQLLSQRGPLQSINTPMIRAWFDP---HHHHHHHQQSMTTDDL
gm033704_Glyma1 GGFVFNTPA---PVPAFGQFFSQRGPLQSSNTPSIRAWIDPSVDHHHHHHHYLSQL----
                ***** :*:   ** : .*::******** *** ****:**   *******  *      

AT1G53230.1     HHHHPYHIPPGIHQSAIPGIAFASSGEFSGFRIPARFQGEQEEHGGDNKPSSASSDSRH
gm033704_Glyma1 -----------IHQGSVAGGSGFSSG-FSGFRIPARIQGEEEHDGVSDKPSSASSDSRH
                           ***.::.* :  *** *********:***:*..* .:***********
BoxShade v3.31 C (beta, 970507) Output
AT1G53230.1     M A P D N D H F L D S P S P P L L E M R H H Q S A T E N - - - - - - - G G G C G E I V E V Q G G H I V R S T G R K D R H
gm033704_Glyma1    - - - - - - - - M G E P Q H P - - - H Q H H Q Q A A A T P S R A A M R G G G G G E I V E V Q G G H I V R S T G R K D R H
 
AT1G53230.1     S K V C T A K G P R D R R V R L S A P T A I Q F Y D V Q D R L G F D R P S K A V D W L I T K A K S A I D D L A Q L P P W
gm033704_Glyma1    S K V C T A K G P R D R R V R L A A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K A A I D Q L A E L P P W
 
AT1G53230.1     N P A D T L R Q H - - - - - - - - A A A A A N A K P R K T K T L I S P P P P Q P E E T E H H - - R I G E E E D N E S S F
gm033704_Glyma1    N P T A T P M Q P P S Q E I P S V A A A R A P L S P R L L E I - - - - - - - Q N N S L T H N S S S I S I K Y N S G S G F
 
AT1G53230.1     L P A S M D S D S I A D T I K S F F P V A S T Q Q S Y H H Q P P S R G N T Q N Q D L L R L S L Q S F Q N G P P F P N Q T
gm033704_Glyma1    L P A S L D T D N I A E T I K T F F P V E A T T T S F Q S Y P P A P P D L G Q Q D - L R L S L Q S F Q D P I M L H H Q P
 
AT1G53230.1     - - - - E P A L F S G Q S N N Q L A F D S S T A S W - - - - E Q S H Q S P E F G K I Q R L V S W N N V G A A E S A G S T
gm033704_Glyma1    Q S H H E P V L F A G T A A A A L G F D G G Y G - W S E H Q H Q N H H S E E - - - - Q R L L Y - - - - - A G G N S G H G
 
AT1G53230.1     G G F V F A S P S S L H P V Y S Q S Q L L S Q R G P L Q S I N T P M I R A W F D P - - - H H H H H H H Q Q S M T T D D L
gm033704_Glyma1    G G F V F N T P A - - - P V P A F G Q F F S Q R G P L Q S S N T P S I R A W I D P S V D H H H H H H H Y L S Q L - - - -
 
AT1G53230.1     H H H H P Y H I P P G I H Q S A I P G I A F A S S G E F S G F R I P A R F Q G E Q E E H G G D N K P S S A S S D S R H
gm033704_Glyma1    - - - - - - - - - - - I H Q G S V A G G S G F S S G - F S G F R I P A R I Q G E E E H D G V S D K P S S A S S D S R H
 
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