fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024326 SSQSQDLRLSLLSFQG in 214/408 AT3G15030.2 not_not 0.431059506 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G53230.1     MAPDNDHFLDSPSPPLLEMRHHQSATENGGG----CGEIVEVQGGHIVRSTGRKDRHSKV
pt024326_POPTR_ ----------------MGESHHQAATSSRLGISNTVGEIVEVQGGLIVRPTGRKDRHSKV
                                :   ***:**..  *     ********* ***.**********

AT1G53230.1     CTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQLPPWNPA
pt024326_POPTR_ CTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTSIDELAELPAWDP-
                *************** *************:***********.***::**:**:**.*:* 

AT1G53230.1     DTLRQHAAAAANAKPRKTKTLISPPPPQP--EETEH-------------------HRIGE
pt024326_POPTR_ --------TTAGFTPKTSKTATRSTKQQNICDEKEYGLSVENVATSKIAEVQNTQQQMAE
                        ::*. .*:.:**   ..  *   :*.*:                   :::.*

AT1G53230.1     EEDNESSFLPASMDSDSIADTIKSFFPV--ASTQQS-----YHHQPP---SRGNTQNQDL
pt024326_POPTR_ NPNSSLGFLPPSLESDVIADTIKTFFPILGASTETSSPTIQFQNYPPDLMSRTSSQSQD-
                : :.. .***.*::** ******:***:  ***: *     ::: **   ** .:*.** 

AT1G53230.1     LRLSLQSFQNGPPF----------PNQTEPALFSGQSNNQLAFDSSTASWEQSHQSPEFG
pt024326_POPTR_ LRLSLLSFQ-GPILLQHQAHHHGHQAQSEHQVFSGTTAHHVGFDCSSGGWSEQHYPQEIT
                ***** *** ** :            *:*  :*** : :::.**.*:..*.:.* . *: 

AT1G53230.1     KIQR-LVSWNNVGAAESAGSTGGFVFAS---------PSSL-HPVYSQSQLLSQRGPLQS
pt024326_POPTR_ RFQRNLVAWNAADAGSGGGGSAGLIFNAPLPPPQTMPPSPLVQPFFGQNQFFSQRGTLQS
                ::** **:** ..*....*.:.*::* :         **.* :*.:.*.*::****.***

AT1G53230.1     INTPMIRAWFDP-----HHHHHHHQQSMTTDDLHHHHPYHIPPGIHQSAIPGIAF-ASSG
pt024326_POPTR_ SNTPSFRAWIDPAITPDHHLQLQQQQ-------------------QQTAISGIGFTASDG
                 *** :***:**     ** : ::**                   :*:**.**.* **.*

AT1G53230.1     EFSGFRIPARFQGEQEEHGG-DNKPSSASSDSRH
pt024326_POPTR_ GFSGFRVPTRIQGEEEERDGIHNKPSSASSDSRS
                 *****:*:*:***:**:.* .***********
BoxShade v3.31 C (beta, 970507) Output
AT1G53230.1     M A P D N D H F L D S P S P P L L E M R H H Q S A T E N G G G - - - - C G E I V E V Q G G H I V R S T G R K D R H S K V
pt024326_POPTR_    - - - - - - - - - - - - - - - - M G E S H H Q A A T S S R L G I S N T V G E I V E V Q G G L I V R P T G R K D R H S K V
 
AT1G53230.1     C T A K G P R D R R V R L S A P T A I Q F Y D V Q D R L G F D R P S K A V D W L I T K A K S A I D D L A Q L P P W N P A
pt024326_POPTR_    C T A K G P R D R R V R L S A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K T S I D E L A E L P A W D P -
 
AT1G53230.1     D T L R Q H A A A A A N A K P R K T K T L I S P P P P Q P - - E E T E H - - - - - - - - - - - - - - - - - - - H R I G E
pt024326_POPTR_    - - - - - - - - T T A G F T P K T S K T A T R S T K Q Q N I C D E K E Y G L S V E N V A T S K I A E V Q N T Q Q Q M A E
 
AT1G53230.1     E E D N E S S F L P A S M D S D S I A D T I K S F F P V - - A S T Q Q S - - - - - Y H H Q P P - - - S R G N T Q N Q D L
pt024326_POPTR_    N P N S S L G F L P P S L E S D V I A D T I K T F F P I L G A S T E T S S P T I Q F Q N Y P P D L M S R T S S Q S Q D -
 
AT1G53230.1     L R L S L Q S F Q N G P P F - - - - - - - - - - P N Q T E P A L F S G Q S N N Q L A F D S S T A S W E Q S H Q S P E F G
pt024326_POPTR_    L R L S L L S F Q - G P I L L Q H Q A H H H G H Q A Q S E H Q V F S G T T A H H V G F D C S S G G W S E Q H Y P Q E I T
 
AT1G53230.1     K I Q R - L V S W N N V G A A E S A G S T G G F V F A S - - - - - - - - - P S S L - H P V Y S Q S Q L L S Q R G P L Q S
pt024326_POPTR_    R F Q R N L V A W N A A D A G S G G G G S A G L I F N A P L P P P Q T M P P S P L V Q P F F G Q N Q F F S Q R G T L Q S
 
AT1G53230.1     I N T P M I R A W F D P - - - - - H H H H H H H Q Q S M T T D D L H H H H P Y H I P P G I H Q S A I P G I A F - A S S G
pt024326_POPTR_    S N T P S F R A W I D P A I T P D H H L Q L Q Q Q Q - - - - - - - - - - - - - - - - - - - Q Q T A I S G I G F T A S D G
 
AT1G53230.1     E F S G F R I P A R F Q G E Q E E H G G - D N K P S S A S S D S R H
pt024326_POPTR_    G F S G F R V P T R I Q G E E E E R D G I H N K P S S A S S D S R S
 
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