fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016057 DLGHQDLRLSLQSFQD in 221/391 AT3G15030.2 not_not 0.433962264 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G53230.1     MAPDNDHFLDSPSPPLLEMRHHQS----------ATENGGGCGEIVEVQGGHIVRSTGRK
gm016057_Glyma0 ---------------MGELQHHQQQAAAAAAPSRAAMRGVGGGEIVEVQGGHIVRSTGRK
                               : *::***.          *: .* * ******************

AT1G53230.1     DRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQL
gm016057_Glyma0 DRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDQLAEL
                *******************:* *************:***********.***:***:**:*

AT1G53230.1     PPWNPADTLRQHAAAAANAKPRKTKTLISPPPPQPEETEH--------------------
gm016057_Glyma0 PPWNP---------TATSMQPRQL----------PQEIVHCENKSLAMDDSMTAAFSSRG
                *****         :*:. :**:           *:*  *                    

AT1G53230.1     -------HRIGEEEDNE----------------SSFLPASMDSDSIADTIKSFFPVASTQ
gm016057_Glyma0 ESNAFASHQ--QVEDNENANNISSSSGNKYNTGSGFLPASLDTDNIAETIKTFFPVEATS
                       *:  : ****                *.*****:*:*.**:***:**** :*.

AT1G53230.1     QSYHHQPPSRGNTQNQDLLRLSLQSFQNGPPFPNQT----EPALFSGQSNNQLAFDSSTA
gm016057_Glyma0 TSFQSYPPAPPDLGHQD-LRLSLQSFQDPIMLHHQPHSHHQPVLFAGTAAAALDFDGGSG
                 *::  **:  :  :** *********:   : :*.    :*.**:* :   * **..:.

AT1G53230.1     SW--------EQSHQSPEFGKIQRLVSWNNVGAAESAGSTGGFVFASPSSLH-PVYSQSQ
gm016057_Glyma0 -WSEHLHQHQQQNHHSEE----QRLLY-----AGGNSGHGGGFVFNTPAPVQVPAF--GQ
                 *        :*.*:* *    ***:      *. .:*  ***** :*:.:: *.:  .*

AT1G53230.1     LLSQRGPLQSINTPMIRAWFDP---HHHHHHHQQSMTTDDLHHHHPYHIPPGIHQSAIPG
gm016057_Glyma0 FFSQRGPLQSSNTPSIRAWIDPSVDHHHHHHHYLSQL---------------IHQGSVAG
                ::******** *** ****:**   *******  *                 ***.::.*

AT1G53230.1     IAFASSGEFSGFRIPARFQGEQEEHGGDNKPSSASSDSRH
gm016057_Glyma0 -----GGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH
                     .* *********:***:*..* .:***********
BoxShade v3.31 C (beta, 970507) Output
AT1G53230.1     M A P D N D H F L D S P S P P L L E M R H H Q S - - - - - - - - - - A T E N G G G C G E I V E V Q G G H I V R S T G R K
gm016057_Glyma0    - - - - - - - - - - - - - - - M G E L Q H H Q Q Q A A A A A A P S R A A M R G V G G G E I V E V Q G G H I V R S T G R K
 
AT1G53230.1     D R H S K V C T A K G P R D R R V R L S A P T A I Q F Y D V Q D R L G F D R P S K A V D W L I T K A K S A I D D L A Q L
gm016057_Glyma0    D R H S K V C T A K G P R D R R V R L A A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K A A I D Q L A E L
 
AT1G53230.1     P P W N P A D T L R Q H A A A A A N A K P R K T K T L I S P P P P Q P E E T E H - - - - - - - - - - - - - - - - - - - -
gm016057_Glyma0    P P W N P - - - - - - - - - T A T S M Q P R Q L - - - - - - - - - - P Q E I V H C E N K S L A M D D S M T A A F S S R G
 
AT1G53230.1     - - - - - - - H R I G E E E D N E - - - - - - - - - - - - - - - - S S F L P A S M D S D S I A D T I K S F F P V A S T Q
gm016057_Glyma0    E S N A F A S H Q - - Q V E D N E N A N N I S S S S G N K Y N T G S G F L P A S L D T D N I A E T I K T F F P V E A T S
 
AT1G53230.1     Q S Y H H Q P P S R G N T Q N Q D L L R L S L Q S F Q N G P P F P N Q T - - - - E P A L F S G Q S N N Q L A F D S S T A
gm016057_Glyma0    T S F Q S Y P P A P P D L G H Q D - L R L S L Q S F Q D P I M L H H Q P H S H H Q P V L F A G T A A A A L D F D G G S G
 
AT1G53230.1     S W - - - - - - - - E Q S H Q S P E F G K I Q R L V S W N N V G A A E S A G S T G G F V F A S P S S L H - P V Y S Q S Q
gm016057_Glyma0    - W S E H L H Q H Q Q Q N H H S E E - - - - Q R L L Y - - - - - A G G N S G H G G G F V F N T P A P V Q V P A F - - G Q
 
AT1G53230.1     L L S Q R G P L Q S I N T P M I R A W F D P - - - H H H H H H H Q Q S M T T D D L H H H H P Y H I P P G I H Q S A I P G
gm016057_Glyma0    F F S Q R G P L Q S S N T P S I R A W I D P S V D H H H H H H H Y L S Q L - - - - - - - - - - - - - - - I H Q G S V A G
 
AT1G53230.1     I A F A S S G E F S G F R I P A R F Q G E Q E E H G G D N K P S S A S S D S R H
gm016057_Glyma0    - - - - - G G G F S G F R I P A R I Q G E E E H D G V S D K P S S A S S D S R H
 
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