fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp000633 not found in 474aa AT2G47900.2 1st_not 0.508152173 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G53320.1     --------------------MPLSRSL------LSRR-----------------------
pp000633_Pp1s10 MLASECLTVHGLRRWLKLWLILLKRSLEGIWCEVSRRELGFCKWTMSGQKSSSMMPLKSL
                                    : *.***      :***                       

AT1G53320.1     ----------ISN----SFRF-----HQGETTTAPESESIPPPSNMAGSSSWSAMLPELL
pp000633_Pp1s10 IREFQEMKGGIGNISRRSFELKFPHHHRGRSSGMVLDESQLRPERVVEQSCWANMPPELL
                          *.*    **.:     *:*.::    .**   *..:. .*.*: * ****

AT1G53320.1     GEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGPRD
pp000633_Pp1s10 RDVIQRVEVSESTWPSRKHVVACAAVCSSWREITKELVRTPEQSGRLTFPIALKQPGPRE
                 ::*:*** :*. **.*:.**:**.*...*****:::.*:. :**::*** .** ****:

AT1G53320.1     FSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGS
pp000633_Pp1s10 NTVQCFIKRDRTTSTYQLFLGLPPSLIENGKFLLAARKFRRATSTDYIISLNQEDMSRGS
                 : **:***::.***: *:*.*.**: ::********:** .: *:*****: :*:*:**

AT1G53320.1     NAYVGKLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFASKQISPQVPAGNFEVGHVSY
pp000633_Pp1s10 NTYVGKLRSNFLGTKFTIYDSQPPHNRGVASN-RSSRRIGSKQLTSRVHAGSYNVAHIAY
                *:*******:****:**:******** . .** ::***:.***::.:* **.::*.*::*

AT1G53320.1     KFNLLKSRGPRRMVSTLR------------CPSP--------------------SPSSSS
pp000633_Pp1s10 ELNVLGTRGPRRMQCMLHTIPMSAMESGGSAPTPTEFTASTLEDTHVAYSGILSSPRSRA
                ::*:* :****** . *:            .*:*                    ** * :

AT1G53320.1     AGLSSDQKPCDVTKIMKKPNKDGSSLTILKNKAPRWHEHLQCWCLNFHGRVTVASVKNFQ
pp000633_Pp1s10 AVVDSSTLDCD---FVSGPLTKDAPL-ILKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQ
                * :.*.   **   ::. * ...:.* ***********:********:************

AT1G53320.1     LVATVDQSQPSGKGDEETVLLQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE
pp000633_Pp1s10 LVAATDLPPTNSQNDHDKVLLQFGKIGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
                ***:.* . ...:.*.:.*******:*.* ****** ************:**.******
BoxShade v3.31 C (beta, 970507) Output
AT1G53320.1     - - - - - - - - - - - - - - - - - - - - M P L S R S L - - - - - - L S R R - - - - - - - - - - - - - - - - - - - - - - -
pp000633_Pp1s10    M L A S E C L T V H G L R R W L K L W L I L L K R S L E G I W C E V S R R E L G F C K W T M S G Q K S S S M M P L K S L
 
AT1G53320.1     - - - - - - - - - - I S N - - - - S F R F - - - - - H Q G E T T T A P E S E S I P P P S N M A G S S S W S A M L P E L L
pp000633_Pp1s10    I R E F Q E M K G G I G N I S R R S F E L K F P H H H R G R S S G M V L D E S Q L R P E R V V E Q S C W A N M P P E L L
 
AT1G53320.1     G E I I R R V E E T E D R W P Q R R D V V T C A C V S K K W R E I T H D F A R S S L N S G K I T F P S C L K L P G P R D
pp000633_Pp1s10    R D V I Q R V E V S E S T W P S R K H V V A C A A V C S S W R E I T K E L V R T P E Q S G R L T F P I A L K Q P G P R E
 
AT1G53320.1     F S N Q C L I K R N K K T S T F Y L Y L A L T P S F T D K G K F L L A A R R F R T G A Y T E Y I I S L D A D D F S Q G S
pp000633_Pp1s10    N T V Q C F I K R D R T T S T Y Q L F L G L P P S L I E N G K F L L A A R K F R R A T S T D Y I I S L N Q E D M S R G S
 
AT1G53320.1     N A Y V G K L R S D F L G T N F T V Y D S Q P P H N G A K P S N G K A S R R F A S K Q I S P Q V P A G N F E V G H V S Y
pp000633_Pp1s10    N T Y V G K L R S N F L G T K F T I Y D S Q P P H N R G V A S N - R S S R R I G S K Q L T S R V H A G S Y N V A H I A Y
 
AT1G53320.1     K F N L L K S R G P R R M V S T L R - - - - - - - - - - - - C P S P - - - - - - - - - - - - - - - - - - - - S P S S S S
pp000633_Pp1s10    E L N V L G T R G P R R M Q C M L H T I P M S A M E S G G S A P T P T E F T A S T L E D T H V A Y S G I L S S P R S R A
 
AT1G53320.1     A G L S S D Q K P C D V T K I M K K P N K D G S S L T I L K N K A P R W H E H L Q C W C L N F H G R V T V A S V K N F Q
pp000633_Pp1s10    A V V D S S T L D C D - - - F V S G P L T K D A P L - I L K N K A P R W H E Q L Q C W C L N F R G R V T V A S V K N F Q
 
AT1G53320.1     L V A T V D Q S Q P S G K G D E E T V L L Q F G K V G D D T F T M D Y R Q P L S A F Q A F A I C L T S F G T K L A C E
pp000633_Pp1s10    L V A A T D L P P T N S Q N D H D K V L L Q F G K I G K D M F T M D Y R Y P L S A F Q A F A I C L S S F D T K L A C E
 
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