fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032884 not found in 513aa AT1G53320.1 1st_1st 0.597826086 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G53320.1     ----------MPLSRSLLS-----------------------------------------
Sb032884_Sorbi1 IFGAVSSPFFFPLSFSFLSLASLPCSLPPPAPFIPPSARANLFRGRAGIGARRPPVMISW
                          :*** *:**                                         

AT1G53320.1     RR----ISNSFRFH-----QGETTTAPESESIPPPSNM-------AGSSSWSAMLPELLG
Sb032884_Sorbi1 RRSASWLSSASRSSLGAAVGGEAKVTPE---VDPAAAQEMEEDEEADEERWSRLLPELLT
                **    :*.: *        **:..:**   : *.:         *... ** :***** 

AT1G53320.1     EIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGPRDF
Sb032884_Sorbi1 EIMRRVDAGAERWPPRRDVVVCACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRDA
                **:***:   :*** *****.****.::**: : ...*..*:.*:*****.** ***** 

AT1G53320.1     SNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSN
Sb032884_Sorbi1 PMHCFIRRDKKNSTFSLYLSLTQALTDKGKFLLAARRFRQGAHTEYIISYDYDDLHPRSS
                . :*:*:*:**.*** ***:** ::************** **:****** * **:   *.

AT1G53320.1     AYVGKLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFASKQISPQVPAGNFEVGHVSYK
Sb032884_Sorbi1 SYVGKLRSDFLGTKFIIYDSQAPYDGAKPSRSRSTRRFASKQISPQVSGGNFEVGQVTYK
                :************:* :****.*::*****..:::************..******:*:**

AT1G53320.1     FNLLKSRGPRRMVSTLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKPNKDGSSLTILKNKA
Sb032884_Sorbi1 FNFMKSRGPRRMQCNIQCP------VSQGTMSDPS--------KEKTPSSSSLD-LKNKA
                **::******** ..::**       * *  ** .        *: . ..***  *****

AT1G53320.1     PRWHEHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPSGKGDEETVLLQFGKVGDDTFTM
Sb032884_Sorbi1 PRWHDHLQCWCLNFHGRVTVASVKNFQLVATAGSGGPWGVGDEETVILQFGKIEDDAFTM
                ****:**************************.... * * ******:*****: **:***

AT1G53320.1     DYRQPLSAFQAFAICLTSFGTKLACE
Sb032884_Sorbi1 DYRQPLSAFQAFAICLTSFGTKLACE
                **************************
BoxShade v3.31 C (beta, 970507) Output
AT1G53320.1     - - - - - - - - - - M P L S R S L L S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb032884_Sorbi1    I F G A V S S P F F F P L S F S F L S L A S L P C S L P P P A P F I P P S A R A N L F R G R A G I G A R R P P V M I S W
 
AT1G53320.1     R R - - - - I S N S F R F H - - - - - Q G E T T T A P E S E S I P P P S N M - - - - - - - A G S S S W S A M L P E L L G
Sb032884_Sorbi1    R R S A S W L S S A S R S S L G A A V G G E A K V T P E - - - V D P A A A Q E M E E D E E A D E E R W S R L L P E L L T
 
AT1G53320.1     E I I R R V E E T E D R W P Q R R D V V T C A C V S K K W R E I T H D F A R S S L N S G K I T F P S C L K L P G P R D F
Sb032884_Sorbi1    E I M R R V D A G A E R W P P R R D V V V C A C V C R R W R D A A V S V V R P P L E C G R I T F P S S L K Q P G P R D A
 
AT1G53320.1     S N Q C L I K R N K K T S T F Y L Y L A L T P S F T D K G K F L L A A R R F R T G A Y T E Y I I S L D A D D F S Q G S N
Sb032884_Sorbi1    P M H C F I R R D K K N S T F S L Y L S L T Q A L T D K G K F L L A A R R F R Q G A H T E Y I I S Y D Y D D L H P R S S
 
AT1G53320.1     A Y V G K L R S D F L G T N F T V Y D S Q P P H N G A K P S N G K A S R R F A S K Q I S P Q V P A G N F E V G H V S Y K
Sb032884_Sorbi1    S Y V G K L R S D F L G T K F I I Y D S Q A P Y D G A K P S R S R S T R R F A S K Q I S P Q V S G G N F E V G Q V T Y K
 
AT1G53320.1     F N L L K S R G P R R M V S T L R C P S P S P S S S S A G L S S D Q K P C D V T K I M K K P N K D G S S L T I L K N K A
Sb032884_Sorbi1    F N F M K S R G P R R M Q C N I Q C P - - - - - - V S Q G T M S D P S - - - - - - - - K E K T P S S S S L D - L K N K A
 
AT1G53320.1     P R W H E H L Q C W C L N F H G R V T V A S V K N F Q L V A T V D Q S Q P S G K G D E E T V L L Q F G K V G D D T F T M
Sb032884_Sorbi1    P R W H D H L Q C W C L N F H G R V T V A S V K N F Q L V A T A G S G G P W G V G D E E T V I L Q F G K I E D D A F T M
 
AT1G53320.1     D Y R Q P L S A F Q A F A I C L T S F G T K L A C E
Sb032884_Sorbi1    D Y R Q P L S A F Q A F A I C L T S F G T K L A C E
 
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