fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G53320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034540 not found in 378aa AT1G53320.1 not_1st 0.735054347 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G53320.1     MPLSRSLLSRRISNSFRF---HQGETTTAPESESIPPPSNMAGSSSWSAMLPELLGEIIR
gm034540_Glyma1 MSLRKVFRSRKFSKSFKEVLPAEGAAVEGGVAGTVEEAAN-GNNNGWSSMLPEILGEIVR
                *.* : : **::*:**:     :* :. .  : ::  .:* .....**:****:****:*

AT1G53320.1     RVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGPRDFSNQC
gm034540_Glyma1 RVDAAEEQWPNRQNVVACACVCKRWRDITREVVRVPSHTGKITFPSCLKQPGPRDVPHQC
                **: :*::**:*::**:****.*:**:**::..* . ::********** *****..:**

AT1G53320.1     LIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSNAYVG
gm034540_Glyma1 LIKRNQKTSTFYLYLALTPSFTDKGKFLLAARRYRCGTHTEYIISLDADDLSQGSNAYVG
                *****:***************************:* *::***********:*********

AT1G53320.1     KLRSDFLGTNFTVYDSQPPHNGAKPSNGKASRRFASKQISPQVPAGNFEVGHVSYKFNLL
gm034540_Glyma1 KLSSDFLGTNFTIYDSQPPHSGAKPSSGRASRRFASKQISPQVPAGNFEVGQVSYKFNLL
                ** *********:*******.*****.*:**********************:********

AT1G53320.1     KSRGPRRMVSTLRCPSPSPSSSSAGLSSDQKPCDVTKIMKKPNKDGSSLTILKNKAPRWH
gm034540_Glyma1 KSRGPRRMVCSLKCPV-TPVSPTSG-SSDSTPVNGHKMHDK-EQAASGYTILKNKAPRWH
                *********.:*:**  :* *.::* ***..* :  *: .* :: .*. ***********

AT1G53320.1     EHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPSGKGDEETVLLQFGKVGDDTFTMDYRQ
gm034540_Glyma1 EHLQCWCLNFHGRVTVASVKNFQLVATVDQSQPGGKGDEETVLLQFGKVGDDTFTMDYRQ
                *********************************.**************************

AT1G53320.1     PLSAFQAFAICLTSFGTKLACE
gm034540_Glyma1 PLSAFQAFAICLTSFGTKLACE
                **********************
BoxShade v3.31 C (beta, 970507) Output
AT1G53320.1     M P L S R S L L S R R I S N S F R F - - - H Q G E T T T A P E S E S I P P P S N M A G S S S W S A M L P E L L G E I I R
gm034540_Glyma1    M S L R K V F R S R K F S K S F K E V L P A E G A A V E G G V A G T V E E A A N - G N N N G W S S M L P E I L G E I V R
 
AT1G53320.1     R V E E T E D R W P Q R R D V V T C A C V S K K W R E I T H D F A R S S L N S G K I T F P S C L K L P G P R D F S N Q C
gm034540_Glyma1    R V D A A E E Q W P N R Q N V V A C A C V C K R W R D I T R E V V R V P S H T G K I T F P S C L K Q P G P R D V P H Q C
 
AT1G53320.1     L I K R N K K T S T F Y L Y L A L T P S F T D K G K F L L A A R R F R T G A Y T E Y I I S L D A D D F S Q G S N A Y V G
gm034540_Glyma1    L I K R N Q K T S T F Y L Y L A L T P S F T D K G K F L L A A R R Y R C G T H T E Y I I S L D A D D L S Q G S N A Y V G
 
AT1G53320.1     K L R S D F L G T N F T V Y D S Q P P H N G A K P S N G K A S R R F A S K Q I S P Q V P A G N F E V G H V S Y K F N L L
gm034540_Glyma1    K L S S D F L G T N F T I Y D S Q P P H S G A K P S S G R A S R R F A S K Q I S P Q V P A G N F E V G Q V S Y K F N L L
 
AT1G53320.1     K S R G P R R M V S T L R C P S P S P S S S S A G L S S D Q K P C D V T K I M K K P N K D G S S L T I L K N K A P R W H
gm034540_Glyma1    K S R G P R R M V C S L K C P V - T P V S P T S G - S S D S T P V N G H K M H D K - E Q A A S G Y T I L K N K A P R W H
 
AT1G53320.1     E H L Q C W C L N F H G R V T V A S V K N F Q L V A T V D Q S Q P S G K G D E E T V L L Q F G K V G D D T F T M D Y R Q
gm034540_Glyma1    E H L Q C W C L N F H G R V T V A S V K N F Q L V A T V D Q S Q P G G K G D E E T V L L Q F G K V G D D T F T M D Y R Q
 
AT1G53320.1     P L S A F Q A F A I C L T S F G T K L A C E
gm034540_Glyma1    P L S A F Q A F A I C L T S F G T K L A C E
 
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