fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G54330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040979 not found in 340aa AT1G54330.1 not_1st 0.583969465 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G54330.1     MAPMSLPPGFRFHPTDEELVAYYLDRKVNGQAIELEIIPEVDLYKCEPWDLPEKSFLPGN
pt040979_POPTR_ MAPMSLPPGFRFHPTDEELVAYYLDRKINGHTIELEIIPEVDLYKCEPWDLPDKSFLPSK
                ***************************:**::********************:*****.:

AT1G54330.1     DMEWYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESKKMKMGMKKTLVYYRGRAPH
pt040979_POPTR_ DMEWYFYSPRDKKYPNGSRTNRATRAGYWKATGKDRPVQSQKRPAGMKKTLVYYRGRAPH
                ********.***************************.*:*:*   ***************

AT1G54330.1     GLRTNWVMHEYRLTHA----PSSSLKESYALCRVFKKNIQIPKRKGEEEEAEEESTSVGK
pt040979_POPTR_ GIRTNWVMHEYRLIDSFCGNASSILKDSYALCRVFRKTVQTPKTKEEKNVGDEERDIAAW
                *:*********** .:    .** **:********:*.:* ** * *:: .:**   .. 

AT1G54330.1     EEEEE---------KEKKWRKCDGNYIEDESLKRASAETSSSELTQG-------------
pt040979_POPTR_ VSEEQLLGDNKCRIEISKGREAEGENFNNDYCKFPS-ETSSSDVTQGTPIETATADDLLA
                 .**:         : .* *:.:*: ::::  * .* *****::***             

AT1G54330.1     -VLLDEANSSS-IFA--LHFSSSLLDDHDH-LFSNYSHQLPYHPPLQLQDFPQLSMNEAE
pt040979_POPTR_ PIASDEANSSANIYSVGVDFSSNLIQDMQMPVYSSLLYQFPY-PSLELEDFPQINIAECV
                 :  ******: *::  :.***.*::* :  ::*.  :*:** *.*:*:****:.: *. 

AT1G54330.1     IMS---IQQDFQC-RDSMNGTLDEIFS----SSATFP-ASL-
pt040979_POPTR_ KPSKPEISDEYMMYKDCMDGTLEQLCSSQDNSNTVLPHARLI
                  *   *.:::   :*.*:***::: *    *.:.:* * *
BoxShade v3.31 C (beta, 970507) Output
AT1G54330.1     M A P M S L P P G F R F H P T D E E L V A Y Y L D R K V N G Q A I E L E I I P E V D L Y K C E P W D L P E K S F L P G N
pt040979_POPTR_    M A P M S L P P G F R F H P T D E E L V A Y Y L D R K I N G H T I E L E I I P E V D L Y K C E P W D L P D K S F L P S K
 
AT1G54330.1     D M E W Y F Y S T R D K K Y P N G S R T N R A T R A G Y W K A T G K D R T V E S K K M K M G M K K T L V Y Y R G R A P H
pt040979_POPTR_    D M E W Y F Y S P R D K K Y P N G S R T N R A T R A G Y W K A T G K D R P V Q S Q K R P A G M K K T L V Y Y R G R A P H
 
AT1G54330.1     G L R T N W V M H E Y R L T H A - - - - P S S S L K E S Y A L C R V F K K N I Q I P K R K G E E E E A E E E S T S V G K
pt040979_POPTR_    G I R T N W V M H E Y R L I D S F C G N A S S I L K D S Y A L C R V F R K T V Q T P K T K E E K N V G D E E R D I A A W
 
AT1G54330.1     E E E E E - - - - - - - - - K E K K W R K C D G N Y I E D E S L K R A S A E T S S S E L T Q G - - - - - - - - - - - - -
pt040979_POPTR_    V S E E Q L L G D N K C R I E I S K G R E A E G E N F N N D Y C K F P S - E T S S S D V T Q G T P I E T A T A D D L L A
 
AT1G54330.1     - V L L D E A N S S S - I F A - - L H F S S S L L D D H D H - L F S N Y S H Q L P Y H P P L Q L Q D F P Q L S M N E A E
pt040979_POPTR_    P I A S D E A N S S A N I Y S V G V D F S S N L I Q D M Q M P V Y S S L L Y Q F P Y - P S L E L E D F P Q I N I A E C V
 
AT1G54330.1     I M S - - - I Q Q D F Q C - R D S M N G T L D E I F S - - - - S S A T F P - A S L -
pt040979_POPTR_    K P S K P E I S D E Y M M Y K D C M D G T L E Q L C S S Q D N S N T V L P H A R L I
 
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