fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G54330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033580 not found in 340aa AT1G54330.1 1st_1st 0.597328244 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G54330.1     MAPMSLPPGFRFHPTDEELVAYYLDRKVNGQAIELEIIPEVDLYKCEPWDLPEKSFLPGN
pt033580_POPTR_ MAPVSLPPGFRFHPTDEELVVYYLDRKINGRTIELEIIPEVDLYKCEPWDLPDKSFLPSK
                ***:****************.******:**::********************:*****.:

AT1G54330.1     DMEWYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESKKMKMGMKKTLVYYRGRAPH
pt033580_POPTR_ DLEWYFLSPRDKKYPNGSRTNRATKAGYWKATGKDRPVNSQKRPVGMKKTLVYYRGRAPH
                *:**** *.***************:***********.*:*:*  :***************

AT1G54330.1     GLRTNWVMHEYRLTH----APSSSLKESYALCRVFKKNIQIPKRKGEEEEAEEESTSVGK
pt033580_POPTR_ GIRTNWVMHEYRLIDSLCGAAPSSLKDSYALCRVFKKTIHIPKKKEEKNNGNEEKDAAWV
                *:*********** .    *..****:**********.*:***:* *:::.:**. :.  

AT1G54330.1     EEEE---EKEKKWRKCDGNYIEDESLK----RASAETSSSELTQGVLL------------
pt033580_POPTR_ SEEQLLGDDTSGIESSKGREAEDENFNNDYCKFPSETSSSDVTQGTPIETAIADDLQAPF
                .**:   :. .  ....*.  ***.::    : .:*****::***. :            

AT1G54330.1     --DEANSS-SIFAL--HFSSSLLDDHDHL-FSNYSHQLPYHPPLQLQDFPQLSMNEAEIM
pt033580_POPTR_ PSDEANSSASLYSMGVDFSSNLIQDMQMPNCSSLHYQFPF-PPLELEDFPQISITESMKP
                  ****** *::::  .***.*::* :    *.  :*:*: ***:*:****:*:.*:   

AT1G54330.1     S---IQQDFQC-RDSMNGTLDEIFS-------SSATFPASL
pt033580_POPTR_ SKPEIIDDYMMYKDCMNGTLEEIFSLCSSQDNSNTVLPMQD
                *   * :*:   :*.*****:****       *.:.:* .
BoxShade v3.31 C (beta, 970507) Output
AT1G54330.1     M A P M S L P P G F R F H P T D E E L V A Y Y L D R K V N G Q A I E L E I I P E V D L Y K C E P W D L P E K S F L P G N
pt033580_POPTR_    M A P V S L P P G F R F H P T D E E L V V Y Y L D R K I N G R T I E L E I I P E V D L Y K C E P W D L P D K S F L P S K
 
AT1G54330.1     D M E W Y F Y S T R D K K Y P N G S R T N R A T R A G Y W K A T G K D R T V E S K K M K M G M K K T L V Y Y R G R A P H
pt033580_POPTR_    D L E W Y F L S P R D K K Y P N G S R T N R A T K A G Y W K A T G K D R P V N S Q K R P V G M K K T L V Y Y R G R A P H
 
AT1G54330.1     G L R T N W V M H E Y R L T H - - - - A P S S S L K E S Y A L C R V F K K N I Q I P K R K G E E E E A E E E S T S V G K
pt033580_POPTR_    G I R T N W V M H E Y R L I D S L C G A A P S S L K D S Y A L C R V F K K T I H I P K K K E E K N N G N E E K D A A W V
 
AT1G54330.1     E E E E - - - E K E K K W R K C D G N Y I E D E S L K - - - - R A S A E T S S S E L T Q G V L L - - - - - - - - - - - -
pt033580_POPTR_    S E E Q L L G D D T S G I E S S K G R E A E D E N F N N D Y C K F P S E T S S S D V T Q G T P I E T A I A D D L Q A P F
 
AT1G54330.1     - - D E A N S S - S I F A L - - H F S S S L L D D H D H L - F S N Y S H Q L P Y H P P L Q L Q D F P Q L S M N E A E I M
pt033580_POPTR_    P S D E A N S S A S L Y S M G V D F S S N L I Q D M Q M P N C S S L H Y Q F P F - P P L E L E D F P Q I S I T E S M K P
 
AT1G54330.1     S - - - I Q Q D F Q C - R D S M N G T L D E I F S - - - - - - - S S A T F P A S L
pt033580_POPTR_    S K P E I I D D Y M M Y K D C M N G T L E E I F S L C S S Q D N S N T V L P M Q D
 
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