fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G54830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006607 not found in 259aa AT1G56170.2 1st_not 0.522857142 II
Sb015279 not found in 253aa AT1G56170.2 1st_not 0.52 II
Gm053118 not found in 294aa AT1G08970.2 1st_not 0.614285714 II
Pt014120 not found in 236aa AT1G08970.2 1st_not 0.637142857 II
Pp015077 not found in 321aa AT1G56170.2 1st_not 0.505714285 II
Sm006602 not found in 147aa AT1G56170.2 1st_not 0.514285714 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G54830.1     --------------------------------------MDQQG--QSSAMN---------
Sb015279_Sorbi1 MEPS---------------------------------------SQPQPVMGV--------
pp015077_Pp1s51 MENHQQLAQQQAQQQQQQDVQQQQQQQQH-----QQQTMNNMMAQQQPQMQY--------
Sm006602_Selmo1 ------------------------------------------------------------
pt014120_POPTR_ --------------------------------------MDQQG-----------------
Os006607_Os02t0 MEPS---------------------------------------SQPQPVMGVAT------
gm053118_Glyma1 MSRNR--SHSFCSRTSLSEVLDSQCLRSAASSFGEGNKMDHQGHSQNPSMGVVGSGAQLA
                                                                            

AT1G54830.1     YGSNPYQTNAMTTTPTGSDH---------PA----------------------------Y
Sb015279_Sorbi1 -GSQPY--------PAAASYAAPTMVAGAPA-VPP-GSQPAAQFP--NPAQLSAQHQMVY
pp015077_Pp1s51 --SQNM--------GMQQSYQGPQSLGGGPETSPSQGGQIQGQSPGAYPTALAQQ-----
Sm006602_Selmo1 ------------------------------------------------------------
pt014120_POPTR_ YGTNPYQPNQM---PAAS---NPGSVPGQPA-----GAQLE-------------QHQLAY
Os006607_Os02t0 GGSQAYP-------PPAAAYPPQAMVPGAPAVVPP-GSQPSAPFP-TNPAQLSAQHQLVY
gm053118_Glyma1 YGSNPYQPGQIT-GPPGSVVTSVGTIQSTPA-----GAQLG-------------QHQLAY
                                                                            

AT1G54830.1     HQI---HQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISA
Sb015279_Sorbi1 QQAQQFHHQLQQQQQQQLREFWTTQMDEIEQTTDFKNHTLPLARIKKIMKADEDVRMISA
pp015077_Pp1s51 QQAQLSYQHLQQQHQQQLQMFWANQMSEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA
Sm006602_Selmo1 ------YQQMQQQHQQQLQQFWQGQMQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA
pt014120_POPTR_ QQI---HQQQQQQLQQQRQSFWTNQYKEIDKVTDFKNHSLPLARIKKIMKADEDVKMISA
Os006607_Os02t0 QQAQQFHQQLQQQQQQQLREFWANQMEEIEQTTDFKNHSLPLARIKKIMKADEDVRMISA
gm053118_Glyma1 QHI---HQQQQHQLQQQLQQFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISA
                      ::: *:*  ** : **  * .**::..***** ****************:****

AT1G54830.1     EAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDL
Sb015279_Sorbi1 EAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPRDEM
pp015077_Pp1s51 EAPVLFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEL
Sm006602_Selmo1 EAPVLFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEL
pt014120_POPTR_ EAPVIFARACEMFILELTLQSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDM
Os006607_Os02t0 EAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEM
gm053118_Glyma1 EAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL
                ****:**:***:*******:** ******************:*****:******:**:::

AT1G54830.1     -RDEVLG---------GVGAEAATAAGYP-YGYLPPGTAP---IG-NPGMVMGN------
Sb015279_Sorbi1 -KEEGLG-LPRVGLPPAMGAPADH-SSYP-YYYVPAQQVP------GAGMMYGG------
pp015077_Pp1s51 NKEDGLG-VPRGAMP--V---GSP-VSYEGVYYVQTPQGPVPQAAIGSPAMMGNSMMGVR
Sm006602_Selmo1 -KEETLG-VTRAAMP--VGPPGDP-MQYPGLYYV--------------------------
pt014120_POPTR_ -KDEVLASIPRGTMP--VGGPVD---ALP-YCYMPHPHAP--QVG-TPGMIMGK------
Os006607_Os02t0 -KEEGLG-LPRVGLPPNVGGAAD---TYP-YYYVPAQQGP------GSGMMYGG------
gm053118_Glyma1 -KDEVLASIPRGTMP--VAGPAD---ALP-YCYMPPQHAS--QVG-AAGVIMGK------
                 ::: *.          :              *:                          

AT1G54830.1     ------------------PGAYP------PNPYMGQPMWQQPGPEQQDPDN---------
Sb015279_Sorbi1 ---------------------------QQGQP--MTYMWQKPQVPEEEPSEEQQQQSP--
pp015077_Pp1s51 PAMAMDPTAMYQPQPQSQPQRPPMQYMQQQAP--MQQMWQ--QQPTQMPPNQQAGMPPNS
Sm006602_Selmo1 --------------------------------------------------------PPAA
pt014120_POPTR_ ------------------PVTDPAMYAQQSHPYMAQHMWPQGPEQQQSPSDQ--------
Os006607_Os02t0 ---------------------------QQGHP--VTYVWQQPQEQQEEAPEEQHSLPESS
gm053118_Glyma1 ------------------PVMDPNMYAQQSHPYMAPQMWPQPPDQRQSSPEH--------
BoxShade v3.31 C (beta, 970507) Output
AT1G54830.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D Q Q G - - Q S S A M N - - - - - - - - -
Sb015279_Sorbi1    M E P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S Q P Q P V M G V - - - - - - - -
pp015077_Pp1s51    M E N H Q Q L A Q Q Q A Q Q Q Q Q Q D V Q Q Q Q Q Q Q Q H - - - - - Q Q Q T M N N M M A Q Q Q P Q M Q Y - - - - - - - -
Sm006602_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt014120_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D Q Q G - - - - - - - - - - - - - - - - -
Os006607_Os02t0    M E P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S Q P Q P V M G V A T - - - - - -
gm053118_Glyma1    M S R N R - - S H S F C S R T S L S E V L D S Q C L R S A A S S F G E G N K M D H Q G H S Q N P S M G V V G S G A Q L A
 
AT1G54830.1     Y G S N P Y Q T N A M T T T P T G S D H - - - - - - - - - P A - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y
Sb015279_Sorbi1    - G S Q P Y - - - - - - - - P A A A S Y A A P T M V A G A P A - V P P - G S Q P A A Q F P - - N P A Q L S A Q H Q M V Y
pp015077_Pp1s51    - - S Q N M - - - - - - - - G M Q Q S Y Q G P Q S L G G G P E T S P S Q G G Q I Q G Q S P G A Y P T A L A Q Q - - - - -
Sm006602_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt014120_POPTR_    Y G T N P Y Q P N Q M - - - P A A S - - - N P G S V P G Q P A - - - - - G A Q L E - - - - - - - - - - - - - Q H Q L A Y
Os006607_Os02t0    G G S Q A Y P - - - - - - - P P A A A Y P P Q A M V P G A P A V V P P - G S Q P S A P F P - T N P A Q L S A Q H Q L V Y
gm053118_Glyma1    Y G S N P Y Q P G Q I T - G P P G S V V T S V G T I Q S T P A - - - - - G A Q L G - - - - - - - - - - - - - Q H Q L A Y
 
AT1G54830.1     H Q I - - - H Q Q Q Q Q Q L T Q Q L Q S F W E T Q F K E I E K T T D F K N H S L P L A R I K K I M K A D E D V R M I S A
Sb015279_Sorbi1    Q Q A Q Q F H H Q L Q Q Q Q Q Q Q L R E F W T T Q M D E I E Q T T D F K N H T L P L A R I K K I M K A D E D V R M I S A
pp015077_Pp1s51    Q Q A Q L S Y Q H L Q Q Q H Q Q Q L Q M F W A N Q M S E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A
Sm006602_Selmo1    - - - - - - Y Q Q M Q Q Q H Q Q Q L Q Q F W Q G Q M Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A
pt014120_POPTR_    Q Q I - - - H Q Q Q Q Q Q L Q Q Q R Q S F W T N Q Y K E I D K V T D F K N H S L P L A R I K K I M K A D E D V K M I S A
Os006607_Os02t0    Q Q A Q Q F H Q Q L Q Q Q Q Q Q Q L R E F W A N Q M E E I E Q T T D F K N H S L P L A R I K K I M K A D E D V R M I S A
gm053118_Glyma1    Q H I - - - H Q Q Q Q H Q L Q Q Q L Q Q F W S N Q Y Q E I E K V T D F K N H S L P L A R I K K I M K A D E D V R M I S A
 
AT1G54830.1     E A P V V F A R A C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L
Sb015279_Sorbi1    E A P V V F A K A C E V F I L E L T L R S W M H T E E N K R R T L Q K N D I A A A I T R T D I Y D F L V D I I P R D E M
pp015077_Pp1s51    E A P V L F A K A C E M F I L E L T L R S W I H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E L
Sm006602_Selmo1    E A P V L F A K A C E M F I L E L T L R S W I H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E L
pt014120_POPTR_    E A P V I F A R A C E M F I L E L T L Q S W N H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E D M
Os006607_Os02t0    E A P V V F A K A C E V F I L E L T L R S W M H T E E N K R R T L Q K N D I A A A I T R T D I Y D F L V D I V P R D E M
gm053118_Glyma1    E A P V I F A R A C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E D L
 
AT1G54830.1     - R D E V L G - - - - - - - - - G V G A E A A T A A G Y P - Y G Y L P P G T A P - - - I G - N P G M V M G N - - - - - -
Sb015279_Sorbi1    - K E E G L G - L P R V G L P P A M G A P A D H - S S Y P - Y Y Y V P A Q Q V P - - - - - - G A G M M Y G G - - - - - -
pp015077_Pp1s51    N K E D G L G - V P R G A M P - - V - - - G S P - V S Y E G V Y Y V Q T P Q G P V P Q A A I G S P A M M G N S M M G V R
Sm006602_Selmo1    - K E E T L G - V T R A A M P - - V G P P G D P - M Q Y P G L Y Y V - - - - - - - - - - - - - - - - - - - - - - - - - -
pt014120_POPTR_    - K D E V L A S I P R G T M P - - V G G P V D - - - A L P - Y C Y M P H P H A P - - Q V G - T P G M I M G K - - - - - -
Os006607_Os02t0    - K E E G L G - L P R V G L P P N V G G A A D - - - T Y P - Y Y Y V P A Q Q G P - - - - - - G S G M M Y G G - - - - - -
gm053118_Glyma1    - K D E V L A S I P R G T M P - - V A G P A D - - - A L P - Y C Y M P P Q H A S - - Q V G - A A G V I M G K - - - - - -
 
AT1G54830.1     - - - - - - - - - - - - - - - - - - P G A Y P - - - - - - P N P Y M G Q P M W Q Q P G P E Q Q D P D N - - - - - - - - -
Sb015279_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - Q Q G Q P - - M T Y M W Q K P Q V P E E E P S E E Q Q Q Q S P - -
pp015077_Pp1s51    P A M A M D P T A M Y Q P Q P Q S Q P Q R P P M Q Y M Q Q Q A P - - M Q Q M W Q - - Q Q P T Q M P P N Q Q A G M P P N S
Sm006602_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P P A A
pt014120_POPTR_    - - - - - - - - - - - - - - - - - - P V T D P A M Y A Q Q S H P Y M A Q H M W P Q G P E Q Q Q S P S D Q - - - - - - - -
Os006607_Os02t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - Q Q G H P - - V T Y V W Q Q P Q E Q Q E E A P E E Q H S L P E S S
gm053118_Glyma1    - - - - - - - - - - - - - - - - - - P V M D P N M Y A Q Q S H P Y M A P Q M W P Q P P D Q R Q S S P E H - - - - - - - -
 
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