fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G54830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp015077 not found in 321aa AT1G56170.2 1st_not 0.505714285 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G54830.1     ------------------------MDQQGQSSAMN-----------YGSN-----PYQ--
pp015077_Pp1s51 MENHQQLAQQQAQQQQQQDVQQQQQQQQHQQQTMNNMMAQQQPQMQYSQNMGMQQSYQGP
                                         :** *..:**           *..*     .**  

AT1G54830.1     ---TNAMTTTPT------GSDHPAY-HQIHQQQQQQLT---------QQLQSFWETQFKE
pp015077_Pp1s51 QSLGGGPETSPSQGGQIQGQSPGAYPTALAQQQQAQLSYQHLQQQHQQQLQMFWANQMSE
                    ..  *:*:      *..  **   : **** **:         **** ** .*:.*

AT1G54830.1     IEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEEN
pp015077_Pp1s51 IEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACEMFILELTLRSWIHTEEN
                **:..*****.*************************:**:************** *****

AT1G54830.1     KRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGA-EAATAAGYPYGY-----
pp015077_Pp1s51 KRRTLQKNDIAAAITRTDIFDFLVDIVPRDELNKE--DGLGVPRGAMPVGSPVSYEGVYY
                *************:***************::*..*  .*:*. ..* ..* * .*     

AT1G54830.1     --LPPGTAP---IGNPGMVMGN------------PGA-YPPNP----------YMG----
pp015077_Pp1s51 VQTPQGPVPQAAIGSPAM-MGNSMMGVRPAMAMDPTAMYQPQPQSQPQRPPMQYMQQQAP
                   * *..*   **.*.* ***            * * * *:*          **     

AT1G54830.1     -QPMWQQPGPEQQDPDN--------
pp015077_Pp1s51 MQQMWQQQ-PTQMPPNQQAGMPPNS
                 * ****  * *  *::
BoxShade v3.31 C (beta, 970507) Output
AT1G54830.1     - - - - - - - - - - - - - - - - - - - - - - - - M D Q Q G Q S S A M N - - - - - - - - - - - Y G S N - - - - - P Y Q - -
pp015077_Pp1s51    M E N H Q Q L A Q Q Q A Q Q Q Q Q Q D V Q Q Q Q Q Q Q Q H Q Q Q T M N N M M A Q Q Q P Q M Q Y S Q N M G M Q Q S Y Q G P
 
AT1G54830.1     - - - T N A M T T T P T - - - - - - G S D H P A Y - H Q I H Q Q Q Q Q Q L T - - - - - - - - - Q Q L Q S F W E T Q F K E
pp015077_Pp1s51    Q S L G G G P E T S P S Q G G Q I Q G Q S P G A Y P T A L A Q Q Q Q A Q L S Y Q H L Q Q Q H Q Q Q L Q M F W A N Q M S E
 
AT1G54830.1     I E K T T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V V F A R A C E M F I L E L T L R S W N H T E E N
pp015077_Pp1s51    I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P V L F A K A C E M F I L E L T L R S W I H T E E N
 
AT1G54830.1     K R R T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L R D E V L G G V G A - E A A T A A G Y P Y G Y - - - - -
pp015077_Pp1s51    K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E L N K E - - D G L G V P R G A M P V G S P V S Y E G V Y Y
 
AT1G54830.1     - - L P P G T A P - - - I G N P G M V M G N - - - - - - - - - - - - P G A - Y P P N P - - - - - - - - - - Y M G - - - -
pp015077_Pp1s51    V Q T P Q G P V P Q A A I G S P A M - M G N S M M G V R P A M A M D P T A M Y Q P Q P Q S Q P Q R P P M Q Y M Q Q Q A P
 
AT1G54830.1     - Q P M W Q Q P G P E Q Q D P D N - - - - - - - -
pp015077_Pp1s51    M Q Q M W Q Q Q - P T Q M P P N Q Q A G M P P N S
 
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