fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G54830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014120 not found in 236aa AT1G08970.2 1st_not 0.637142857 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G54830.1     MDQQGQSSAMNYGSNPYQTNAMTTT---------PTGSD----HPAYHQIHQQQQQQLTQ
pt014120_POPTR_ MDQQG------YGTNPYQPNQMPAASNPGSVPGQPAGAQLEQHQLAYQQIHQQQQQQLQQ
                *****      **:****.* *.::         *:*::    : **:********** *

AT1G54830.1     QLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILE
pt014120_POPTR_ QRQSFWTNQYKEIDKVTDFKNHSLPLARIKKIMKADEDVKMISAEAPVIFARACEMFILE
                * **** .*:***:*.***********************:********:***********

AT1G54830.1     LTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATAA
pt014120_POPTR_ LTLQSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDMKDEVLASIPRGTMPVG
                ***:*********************:*****************::****..:   : ...

AT1G54830.1     G----YPYGYLPPGTAP-IGNPGMVMGNPGAYP------PNPYMGQPMWQQPGPE-QQDP
pt014120_POPTR_ GPVDALPYCYMPHPHAPQVGTPGMIMGKPVTDPAMYAQQSHPYMAQHMWPQ-GPEQQQSP
                *     ** *:*   ** :*.***:**:* : *      .:***.* ** * *** **.*

AT1G54830.1     DN-
pt014120_POPTR_ SDQ
                .:
BoxShade v3.31 C (beta, 970507) Output
AT1G54830.1     M D Q Q G Q S S A M N Y G S N P Y Q T N A M T T T - - - - - - - - - P T G S D - - - - H P A Y H Q I H Q Q Q Q Q Q L T Q
pt014120_POPTR_    M D Q Q G - - - - - - Y G T N P Y Q P N Q M P A A S N P G S V P G Q P A G A Q L E Q H Q L A Y Q Q I H Q Q Q Q Q Q L Q Q
 
AT1G54830.1     Q L Q S F W E T Q F K E I E K T T D F K N H S L P L A R I K K I M K A D E D V R M I S A E A P V V F A R A C E M F I L E
pt014120_POPTR_    Q R Q S F W T N Q Y K E I D K V T D F K N H S L P L A R I K K I M K A D E D V K M I S A E A P V I F A R A C E M F I L E
 
AT1G54830.1     L T L R S W N H T E E N K R R T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L R D E V L G G V G A E A A T A A
pt014120_POPTR_    L T L Q S W N H T E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R E D M K D E V L A S I P R G T M P V G
 
AT1G54830.1     G - - - - Y P Y G Y L P P G T A P - I G N P G M V M G N P G A Y P - - - - - - P N P Y M G Q P M W Q Q P G P E - Q Q D P
pt014120_POPTR_    G P V D A L P Y C Y M P H P H A P Q V G T P G M I M G K P V T D P A M Y A Q Q S H P Y M A Q H M W P Q - G P E Q Q Q S P
 
AT1G54830.1     D N -
pt014120_POPTR_    S D Q
 
0