fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G54830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006607 not found in 259aa AT1G56170.2 1st_not 0.522857142 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G54830.1     MDQQGQ-----------SSAMNYGSNPYQTNAM-----TTTPTGSD-------HPAY---
Os006607_Os02t0 MEPSSQPQPVMGVATGGSQAYPPPAAAYPPQAMVPGAPAVVPPGSQPSAPFPTNPAQLSA
                *: ..*           *.*    : .* .:**     :..*.**:       :**    

AT1G54830.1     ---------HQIHQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADED
Os006607_Os02t0 QHQLVYQQAQQFHQQLQQQQQQQLREFWANQMEEIEQTTDFKNHSLPLARIKKIMKADED
                         :*:*** ***  ***:.** .*::***:***********************

AT1G54830.1     VRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDI
Os006607_Os02t0 VRMISAEAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDI
                *************:***:********** ******************:*****:******

AT1G54830.1     VPREDLRDEVLG--------GVGAEAATAAGYPYGYLPPGTAPIGNPGMVMGNPGAYPPN
Os006607_Os02t0 VPRDEMKEEGLGLPRVGLPPNVGGAADT---YPYYYVPAQQGP--GSGMMYGGQQGHPVT
                ***:::::* **        .**. * *   *** *:*.  .*  ..**: *.  .:* .

AT1G54830.1     PYMGQPMWQQP------GPEQQD--PDN-
Os006607_Os02t0 -Y----VWQQPQEQQEEAPEEQHSLPESS
                 *    :****      .**:*.  *:.
BoxShade v3.31 C (beta, 970507) Output
AT1G54830.1     M D Q Q G Q - - - - - - - - - - - S S A M N Y G S N P Y Q T N A M - - - - - T T T P T G S D - - - - - - - H P A Y - - -
Os006607_Os02t0    M E P S S Q P Q P V M G V A T G G S Q A Y P P P A A A Y P P Q A M V P G A P A V V P P G S Q P S A P F P T N P A Q L S A
 
AT1G54830.1     - - - - - - - - - H Q I H Q Q Q Q Q Q L T Q Q L Q S F W E T Q F K E I E K T T D F K N H S L P L A R I K K I M K A D E D
Os006607_Os02t0    Q H Q L V Y Q Q A Q Q F H Q Q L Q Q Q Q Q Q Q L R E F W A N Q M E E I E Q T T D F K N H S L P L A R I K K I M K A D E D
 
AT1G54830.1     V R M I S A E A P V V F A R A C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A V T R T D I F D F L V D I
Os006607_Os02t0    V R M I S A E A P V V F A K A C E V F I L E L T L R S W M H T E E N K R R T L Q K N D I A A A I T R T D I Y D F L V D I
 
AT1G54830.1     V P R E D L R D E V L G - - - - - - - - G V G A E A A T A A G Y P Y G Y L P P G T A P I G N P G M V M G N P G A Y P P N
Os006607_Os02t0    V P R D E M K E E G L G L P R V G L P P N V G G A A D T - - - Y P Y Y Y V P A Q Q G P - - G S G M M Y G G Q Q G H P V T
 
AT1G54830.1     P Y M G Q P M W Q Q P - - - - - - G P E Q Q D - - P D N -
Os006607_Os02t0    - Y - - - - V W Q Q P Q E Q Q E E A P E E Q H S L P E S S
 
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