fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G54830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015279 not found in 253aa AT1G56170.2 1st_not 0.52 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G54830.1     MDQQGQ-SSAMNYGSNPYQTNAMTTTPT----------GSD------HPAY---------
Sb015279_Sorbi1 MEPSSQPQPVMGVGSQPYPAAASYAAPTMVAGAPAVPPGSQPAAQFPNPAQLSAQHQMVY
                *: ..* ...*. **:** : *  ::**          **:      :**          

AT1G54830.1     ---HQIHQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISA
Sb015279_Sorbi1 QQAQQFHHQLQQQQQQQLREFWTTQMDEIEQTTDFKNHTLPLARIKKIMKADEDVRMISA
                   :*:*:* ***  ***:.** **:.***:*******:*********************

AT1G54830.1     EAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDL
Sb015279_Sorbi1 EAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPRDEM
                *******:***:********** ******************:*****:******:**:::

AT1G54830.1     RDEVLG--------GVGAEAATAAGYPYGYLPPGTAPIGNPGMVMGNPGAYPPNPYMGQP
Sb015279_Sorbi1 KEEGLGLPRVGLPPAMGAPADHSS-YPYYYVPAQQVP--GAGMMYGGQ--------QGQP
                ::* **        .:** *  :: *** *:*.  .*  ..**: *.          ***

AT1G54830.1     ---MWQQPG-PE--------QQDPDN
Sb015279_Sorbi1 MTYMWQKPQVPEEEPSEEQQQQSP--
                   ***:*  **        **.*
BoxShade v3.31 C (beta, 970507) Output
AT1G54830.1     M D Q Q G Q - S S A M N Y G S N P Y Q T N A M T T T P T - - - - - - - - - - G S D - - - - - - H P A Y - - - - - - - - -
Sb015279_Sorbi1    M E P S S Q P Q P V M G V G S Q P Y P A A A S Y A A P T M V A G A P A V P P G S Q P A A Q F P N P A Q L S A Q H Q M V Y
 
AT1G54830.1     - - - H Q I H Q Q Q Q Q Q L T Q Q L Q S F W E T Q F K E I E K T T D F K N H S L P L A R I K K I M K A D E D V R M I S A
Sb015279_Sorbi1    Q Q A Q Q F H H Q L Q Q Q Q Q Q Q L R E F W T T Q M D E I E Q T T D F K N H T L P L A R I K K I M K A D E D V R M I S A
 
AT1G54830.1     E A P V V F A R A C E M F I L E L T L R S W N H T E E N K R R T L Q K N D I A A A V T R T D I F D F L V D I V P R E D L
Sb015279_Sorbi1    E A P V V F A K A C E V F I L E L T L R S W M H T E E N K R R T L Q K N D I A A A I T R T D I Y D F L V D I I P R D E M
 
AT1G54830.1     R D E V L G - - - - - - - - G V G A E A A T A A G Y P Y G Y L P P G T A P I G N P G M V M G N P G A Y P P N P Y M G Q P
Sb015279_Sorbi1    K E E G L G L P R V G L P P A M G A P A D H S S - Y P Y Y Y V P A Q Q V P - - G A G M M Y G G Q - - - - - - - - Q G Q P
 
AT1G54830.1     - - - M W Q Q P G - P E - - - - - - - - Q Q D P D N
Sb015279_Sorbi1    M T Y M W Q K P Q V P E E E P S E E Q Q Q Q S P - -
 
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