fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G55110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009533 not found in 519aa AT1G55110.1 1st_1st 0.419230769 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G55110.1     MMMNRDILFHQQQQQQMEENMSNLTSASGDQASVSSGNRTETSGSNINQHHQEQCFVPQS
pt009533_POPTR_ ----------------MDENMSNLTSASG-EVSASSGSRIET-GAIYPQHSFDSTNQPPP
                                *:*********** :.*.***.* ** *:   **  :.   * .

AT1G55110.1     SLKRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKL
pt009533_POPTR_ --KKKKSFPGNPDPDAEVIALSPNSLQATNRFICEICNKGFKRDQNLQLHRRGHNLPWKL
                  *:*:. ******:***:****::* ********:*****:********:*********

AT1G55110.1     KQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAV
pt009533_POPTR_ KQRTNKE-VKKKVYVCPEVTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAV
                ***:**: *:********  ****.*************** ***************:***

AT1G55110.1     QSDWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESARAMP-NPIMIQASNS
pt009533_POPTR_ QSDWKAHSKICGTREYRCNCGTLFSRRDSFITHRAFCDALAEESVRAITVNPIL--SSQQ
                *******:* ***:**:*:*************************.**:. ***:  :*:.

AT1G55110.1     PHHHHHQTQQNIGFSSSSQNIISNSNLHGPMKQEESQHHYQ-----NIPPWLISSNPNPN
pt009533_POPTR_ P-------------GSSASHLINLQALSVKREHDQNQHHFNPRPEYSIPPWLV-------
                *             .**:.::*. . *    ::::.***::     .*****:       

AT1G55110.1     GNNGNLFPPVASS------VNTGRSSFP---------------HP------------SPA
pt009533_POPTR_ ------FPPIGDAGTGPPQINLSSQLFPENFNQSFLQHGNPSTNPTVLPPFQSASTVSPH
                      ***:..:      :* . . **               :*            ** 

AT1G55110.1     MSATALLQKAAQMGST--KSTTPEEEE---RSSRSSYNNL---ITTTMAAMMT----SPP
pt009533_POPTR_ MSATALLQKAAQMGVTMSKPSPPAAAAAILRPHQGHMSNLNPGFSSTLPAVTSGLFLSSR
                ************** *  *.:.*       *. :.  .**   :::*:.*: :    *. 

AT1G55110.1     E---PGFG-----FQD------------------------YYMMNHQHHGGG--------
pt009533_POPTR_ EGMGSGFGHGLVSFENKAAAVTSGIMEHLAASDAGGPSLVHDMMSSLSSASGFDGSSFDN
                *   .***     *::                        : **.    ..*        

AT1G55110.1     EAFNGGFVPGEEKNDVVD-------------------------DGGGE---TRDFLGLRS
pt009533_POPTR_ EDFNGMLNPKRDGGNFQEILSKSTESQFRRSDHDVRTSAVGSPHGGGNDDLTRDFLGLKA
                * *** : * .: .:. :                         .***:   *******::

AT1G55110.1     LMSHNEILSFANNLGNCLNTSATEQQQQQHSHQD---
pt009533_POPTR_ F-PHKDWLDHIN--------PSTYGQRNQNLPPPWQG
                : .*:: *.. *        .:*  *::*:
BoxShade v3.31 C (beta, 970507) Output
AT1G55110.1     M M M N R D I L F H Q Q Q Q Q Q M E E N M S N L T S A S G D Q A S V S S G N R T E T S G S N I N Q H H Q E Q C F V P Q S
pt009533_POPTR_    - - - - - - - - - - - - - - - - M D E N M S N L T S A S G - E V S A S S G S R I E T - G A I Y P Q H S F D S T N Q P P P
 
AT1G55110.1     S L K R K R N Q P G N P D P E A E V M A L S P K T L M A T N R F I C E V C N K G F Q R D Q N L Q L H K R G H N L P W K L
pt009533_POPTR_    - - K K K K S F P G N P D P D A E V I A L S P N S L Q A T N R F I C E I C N K G F K R D Q N L Q L H R R G H N L P W K L
 
AT1G55110.1     K Q R S N K D V V R K K V Y V C P E P G C V H H H P S R A L G D L T G I K K H F F R K H G E K K W K C E K C S K K Y A V
pt009533_POPTR_    K Q R T N K E - V K K K V Y V C P E V T C V H H D P S R A L G D L T G I K K H F S R K H G E K K W K C E K C S K R Y A V
 
AT1G55110.1     Q S D W K A H A K T C G T K E Y K C D C G T L F S R R D S F I T H R A F C D A L A E E S A R A M P - N P I M I Q A S N S
pt009533_POPTR_    Q S D W K A H S K I C G T R E Y R C N C G T L F S R R D S F I T H R A F C D A L A E E S V R A I T V N P I L - - S S Q Q
 
AT1G55110.1     P H H H H H Q T Q Q N I G F S S S S Q N I I S N S N L H G P M K Q E E S Q H H Y Q - - - - - N I P P W L I S S N P N P N
pt009533_POPTR_    P - - - - - - - - - - - - - G S S A S H L I N L Q A L S V K R E H D Q N Q H H F N P R P E Y S I P P W L V - - - - - - -
 
AT1G55110.1     G N N G N L F P P V A S S - - - - - - V N T G R S S F P - - - - - - - - - - - - - - - H P - - - - - - - - - - - - S P A
pt009533_POPTR_    - - - - - - F P P I G D A G T G P P Q I N L S S Q L F P E N F N Q S F L Q H G N P S T N P T V L P P F Q S A S T V S P H
 
AT1G55110.1     M S A T A L L Q K A A Q M G S T - - K S T T P E E E E - - - R S S R S S Y N N L - - - I T T T M A A M M T - - - - S P P
pt009533_POPTR_    M S A T A L L Q K A A Q M G V T M S K P S P P A A A A A I L R P H Q G H M S N L N P G F S S T L P A V T S G L F L S S R
 
AT1G55110.1     E - - - P G F G - - - - - F Q D - - - - - - - - - - - - - - - - - - - - - - - - Y Y M M N H Q H H G G G - - - - - - - -
pt009533_POPTR_    E G M G S G F G H G L V S F E N K A A A V T S G I M E H L A A S D A G G P S L V H D M M S S L S S A S G F D G S S F D N
 
AT1G55110.1     E A F N G G F V P G E E K N D V V D - - - - - - - - - - - - - - - - - - - - - - - - - D G G G E - - - T R D F L G L R S
pt009533_POPTR_    E D F N G M L N P K R D G G N F Q E I L S K S T E S Q F R R S D H D V R T S A V G S P H G G G N D D L T R D F L G L K A
 
AT1G55110.1     L M S H N E I L S F A N N L G N C L N T S A T E Q Q Q Q Q H S H Q D - - -
pt009533_POPTR_    F - P H K D W L D H I N - - - - - - - - P S T Y G Q R N Q N L P P P W Q G
 
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