fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G55110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009533 not found in 519aa AT1G55110.1 1st_1st 0.419230769 Ia
Pt007881 not found in 461aa AT3G13810.1 not_not 0.416666666 III
Pt007880 not found in 537aa AT3G13810.1 not_not 0.414102564 III
Pt038999 not found in 472aa AT4G02670.1 not_not 0.414102564 III
Pt001960 not found in 474aa AT1G03840.1 not_not 0.403846153 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G55110.1     MMMNRDILFHQQQQQQMEENMSNLTSASGDQASVSSGNRTETSGSNIN----------QH
pt007881_POPTR_ MMKGL----------VMDENMSNLTSAS-GEVSASSGSRIETGAK---------HP--QH
pt001960_POPTR_ ---------------MFPAAMSNSTSLS-EEASVSSGTRVQEFGS-LNPLASNFSPL-QH
pt007880_POPTR_ MMKGL----------VMDENMSNLTSAS-GEVSASSGSRIETGAK---------HP--QH
pt038999_POPTR_ ---------------MFPAAMSNSTSLS-EEASVSSGTRIQDFGS-LNQLASTISPLQQQ
pt009533_POPTR_ ----------------MDENMSNLTSAS-GEVSASSGSRIETGAI---------YP--QH
                                :   *** ** *  :.*.***.* :  .              *:

AT1G55110.1     HQEQCFVPQSSLKRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLH
pt007881_POPTR_ SFDS--TNQPPPKKKKNLPGNPDPDAEVIALSPNSLQTTNRFLCEICNKGFKRDQNLQLH
pt001960_POPTR_ QQQQ----QKIIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLH
pt007880_POPTR_ SFDS--TNQPPPKKKKNLPGNPDPDAEVIALSPNSLQTTNRFLCEICNKGFKRDQNLQLH
pt038999_POPTR_ QQQQ----QRTIKKKRNLPGNPDPDAEVIALSPKTLLTTNRFVCEICNKGFQRDQNLQLH
pt009533_POPTR_ SFDS--TNQPPPKKKKSFPGNPDPDAEVIALSPNSLQATNRFICEICNKGFKRDQNLQLH
                  :.    *   *:*:. ******:***:****::* :****:**:*****:********

AT1G55110.1     KRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWK
pt007881_POPTR_ RRGHNLPWKLKQRTNKE-VRKKVYVCPEVTCVHHDPSRALGDLTGIKKHFSRKHGEKKWK
pt001960_POPTR_ RRGHNLPWKLKQRNSKE-IKKKAYVCPEPTCVHHHPSRALGDLTGIKKHYCRKHGEKKWK
pt007880_POPTR_ RRGHNLPWKLKQRTNKE-VRKKVYVCPEVTCVHHDPSRALGDLTGIKKHFSRKHGEKKWK
pt038999_POPTR_ RRGHNLPWKLKQRNSKE-IKKKAYVCPEPTCVHHHPSRALGDLTGIKKHYCRKHGEKKWK
pt009533_POPTR_ RRGHNLPWKLKQRTNKE-VKKKVYVCPEVTCVHHDPSRALGDLTGIKKHFSRKHGEKKWK
                :************..*: ::**.*****  ****.**************: *********

AT1G55110.1     CEKCSKKYAVQSDWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESAR----
pt007881_POPTR_ CEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDTLAEESAR----
pt001960_POPTR_ CEKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFVTHRAFCDALAEESARLSAH
pt007880_POPTR_ CEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDTLAEESAR----
pt038999_POPTR_ CEKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSAH
pt009533_POPTR_ CEKCSKRYAVQSDWKAHSKICGTREYRCNCGTLFSRRDSFITHRAFCDALAEESVR----
                ****** **********:* ***:**:*:*******:***:*******:*****.*    

AT1G55110.1     ---AMPNP----IMIQASNSPHHHHH-------QTQQNIGFSSS-----SQNIISNSNLH
pt007881_POPTR_ -----------SMTV---LSSQQPGS-------SASHLMNLQA---------------LS
pt001960_POPTR_ QL-ISTDPNAQALLLQNALQA-HPISLFSAPNPTHQQQISLASPWDPPRHHNPSSNNHQN
pt007880_POPTR_ -----------SMTV---LSSQQPGS-------SASHLMNLQA---------------LS
pt038999_POPTR_ QLIISQNPNAHALLLQNPLQTHHPHSLFST---TAHHQISFTSPWDPPHHQNPCSNNPLN
pt009533_POPTR_ -----------AITVNPILSSQQPGS-------SASHLINLQA---------------LS
                            : :    .. :             : :.: :                 

AT1G55110.1     GPMKQEESQHHYQ-----NIPPWLISSN-------------------------------P
pt007881_POPTR_ VKREQDQNQYLFNPRPD-SIPPWLACPPIGEAGP----------------DQSFLQHGNP
pt001960_POPTR_ PVHIKPETHNHFQ------IPPLLQEPP-------------------------------P
pt007880_POPTR_ VKREQDQNQYLFNPRPD-SIPPWLACPPIGEAGPGPPQINLSSQLFPAHLDQSFLQHGNP
pt038999_POPTR_ PVHIKPETTGHFQ------IPASLLQEP-------------------------------P
pt009533_POPTR_ VKREHDQNQHHFNPRPEYSIPPWLVFPPIGDAGTGPPQINLSSQLFPENFNQSFLQHGNP
                    : :.   ::      **. *                                   *

AT1G55110.1     NPNGNNGNLFPPVASSVNTGRSSFPHPSPAMSATALLQKAAQMGSTKSTTPE--------
pt007881_POPTR_ SPNPT---VLPPFQPS--------STASPHMSATALLQKAAQMGVTVSKPSPSPATAAIL
pt001960_POPTR_ PALPSHKGLLASTFHSLSNAVTS-SAASHHLSATALLQKAASVGAAQTSV----------
pt007880_POPTR_ SPNPT---VLPPFQPS--------STASPHMSATALLQKAAQMGVTVSKPSPSPATAAIL
pt038999_POPTR_ LTMPSHKGLLAPTFQSLSNAATS-QASSHHLSATALLQKAASVGATQTSV----------
pt009533_POPTR_ STNPT---VLPPFQSA--------STVSPHMSATALLQKAAQMGVTMSKPSPPAAAAAIL
                 .  .   ::..   :           *  :**********.:* : :.           

AT1G55110.1     ------------------------------------------------------------
pt007881_POPTR_ RPHQGHMSDHQNP-----------------------------------------------
pt001960_POPTR_ ------------------------------------------------------------
pt007880_POPTR_ RPHQGHMSDHQNPGFGSTLPATSTANPGLFFTSREEMGSGFGHGLASLEDKAGTVTSGIM
pt038999_POPTR_ ------------------------------------------------------------
pt009533_POPTR_ RPHQGHMSN-LNPGFSSTLPAVTS---GLFLSSREGMGSGFGHGLVSFENKAAAVTSGIM
                                                                            

AT1G55110.1     EEERSSRSSYNNLITTTMAAMMTSPPEPGF---------------------GFQDYY---
pt007881_POPTR_ -------------VHDMMSSLSSA---SGFDGSSFDNEDFNGMLNPKRDSSNFQEILSKS
pt001960_POPTR_ --------GHSQMTQLDMGELGSA-----------------------------GQVH---
pt007880_POPTR_ EYLAASDGGGTSLVHDMMSSLSSA---SGFDGSSFDNEDFNGMLNPKRDSSNFQEILSKS
pt038999_POPTR_ --------GHSHMTQLDMGELGSA-----------------------------GQVH---
pt009533_POPTR_ EHLAASDAGGPSLVHDMMSSLSSA---SGFDGSSFDNEDFNGMLNPKRDGGNFQEILSKS
                                 *. : ::                              :     

AT1G55110.1     --------------MMNHQHHGGGEAFNGGFVPGEEKNDVVDDGGGETRDFLGLRS----
pt007881_POPTR_ TESRFIRSD-----AASGSHHGGG-------------NDGL------TRDFLGLKA----
pt001960_POPTR_ --------------VNSASHVAQGPNYNLNSLATWQKSDRL------TRDFLGLTG-ECE
pt007880_POPTR_ TESRFIRSD-----AASGSHHGGG-------------NDGL------TRDFLGLKA----
pt038999_POPTR_ --------------VDSVSHVSQGPSYNLNSLATWQKSDRL------TRDFLGLTAPECG
pt009533_POPTR_ TESQFRRSDHDVRTSAVGSPHGGG-------------NDDL------TRDFLGLKA----
                                  .  . *             .* :      ******* .    

AT1G55110.1     -------------------LMSHNEILSFANNLGNCLNTSATEQQQQQHSHQD-------
pt007881_POPTR_ --------------------FPHKDFLNLPAGFDHI--------SPSTYGQRNQNLPPPW
pt001960_POPTR_ DHHGHAASNSNGSSGGVNASMNVREILTYTGGVGF---------HQQQYNERDHSLLKPH
pt007880_POPTR_ --------------------FPHKDFLNLPAGFDHI--------SPSTYGQRNQNLPPPW
pt038999_POPTR_ DHHGHAASNANGS---VNVSMNVREILTYTGGVGF---------HQQQYNERDHSLLKPH
pt009533_POPTR_ --------------------FPHKDWL------DHI--------NPSTYGQRNQNLPPPW
                                    :  .: *      .            . :..::       

AT1G55110.1     ---------------------
pt007881_POPTR_ QGSSMDFQLYNKK--------
pt001960_POPTR_ GG----FGFAQPSASKTWGDC
pt007880_POPTR_ QGSSMDFQLYNKK--------
pt038999_POPTR_ GG----FGFAQPSASEAWGDC
pt009533_POPTR_ QG-------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G55110.1     M M M N R D I L F H Q Q Q Q Q Q M E E N M S N L T S A S G D Q A S V S S G N R T E T S G S N I N - - - - - - - - - - Q H
pt007881_POPTR_    M M K G L - - - - - - - - - - V M D E N M S N L T S A S - G E V S A S S G S R I E T G A K - - - - - - - - - H P - - Q H
pt001960_POPTR_    - - - - - - - - - - - - - - - M F P A A M S N S T S L S - E E A S V S S G T R V Q E F G S - L N P L A S N F S P L - Q H
pt007880_POPTR_    M M K G L - - - - - - - - - - V M D E N M S N L T S A S - G E V S A S S G S R I E T G A K - - - - - - - - - H P - - Q H
pt038999_POPTR_    - - - - - - - - - - - - - - - M F P A A M S N S T S L S - E E A S V S S G T R I Q D F G S - L N Q L A S T I S P L Q Q Q
pt009533_POPTR_    - - - - - - - - - - - - - - - - M D E N M S N L T S A S - G E V S A S S G S R I E T G A I - - - - - - - - - Y P - - Q H
 
AT1G55110.1     H Q E Q C F V P Q S S L K R K R N Q P G N P D P E A E V M A L S P K T L M A T N R F I C E V C N K G F Q R D Q N L Q L H
pt007881_POPTR_    S F D S - - T N Q P P P K K K K N L P G N P D P D A E V I A L S P N S L Q T T N R F L C E I C N K G F K R D Q N L Q L H
pt001960_POPTR_    Q Q Q Q - - - - Q K I I K K K R S L P G N P D P D A E V I A L S P K T L L A T N R F V C E I C N K G F Q R D Q N L Q L H
pt007880_POPTR_    S F D S - - T N Q P P P K K K K N L P G N P D P D A E V I A L S P N S L Q T T N R F L C E I C N K G F K R D Q N L Q L H
pt038999_POPTR_    Q Q Q Q - - - - Q R T I K K K R N L P G N P D P D A E V I A L S P K T L L T T N R F V C E I C N K G F Q R D Q N L Q L H
pt009533_POPTR_    S F D S - - T N Q P P P K K K K S F P G N P D P D A E V I A L S P N S L Q A T N R F I C E I C N K G F K R D Q N L Q L H
 
AT1G55110.1     K R G H N L P W K L K Q R S N K D V V R K K V Y V C P E P G C V H H H P S R A L G D L T G I K K H F F R K H G E K K W K
pt007881_POPTR_    R R G H N L P W K L K Q R T N K E - V R K K V Y V C P E V T C V H H D P S R A L G D L T G I K K H F S R K H G E K K W K
pt001960_POPTR_    R R G H N L P W K L K Q R N S K E - I K K K A Y V C P E P T C V H H H P S R A L G D L T G I K K H Y C R K H G E K K W K
pt007880_POPTR_    R R G H N L P W K L K Q R T N K E - V R K K V Y V C P E V T C V H H D P S R A L G D L T G I K K H F S R K H G E K K W K
pt038999_POPTR_    R R G H N L P W K L K Q R N S K E - I K K K A Y V C P E P T C V H H H P S R A L G D L T G I K K H Y C R K H G E K K W K
pt009533_POPTR_    R R G H N L P W K L K Q R T N K E - V K K K V Y V C P E V T C V H H D P S R A L G D L T G I K K H F S R K H G E K K W K
 
AT1G55110.1     C E K C S K K Y A V Q S D W K A H A K T C G T K E Y K C D C G T L F S R R D S F I T H R A F C D A L A E E S A R - - - -
pt007881_POPTR_    C E K C S K R Y A V Q S D W K A H S K I C G T R E Y R C D C G T L F S R R D S F I T H R A F C D T L A E E S A R - - - -
pt001960_POPTR_    C E K C S K I Y A V Q S D W K A H S K T C G T R E Y R C D C G T L F S R K D S F V T H R A F C D A L A E E S A R L S A H
pt007880_POPTR_    C E K C S K R Y A V Q S D W K A H S K I C G T R E Y R C D C G T L F S R R D S F I T H R A F C D T L A E E S A R - - - -
pt038999_POPTR_    C E K C S K I Y A V Q S D W K A H S K T C G T R E Y R C D C G T L F S R K D S F I T H R A F C D A L A E E S A R L S A H
pt009533_POPTR_    C E K C S K R Y A V Q S D W K A H S K I C G T R E Y R C N C G T L F S R R D S F I T H R A F C D A L A E E S V R - - - -
 
AT1G55110.1     - - - A M P N P - - - - I M I Q A S N S P H H H H H - - - - - - - Q T Q Q N I G F S S S - - - - - S Q N I I S N S N L H
pt007881_POPTR_    - - - - - - - - - - - S M T V - - - L S S Q Q P G S - - - - - - - S A S H L M N L Q A - - - - - - - - - - - - - - - L S
pt001960_POPTR_    Q L - I S T D P N A Q A L L L Q N A L Q A - H P I S L F S A P N P T H Q Q Q I S L A S P W D P P R H H N P S S N N H Q N
pt007880_POPTR_    - - - - - - - - - - - S M T V - - - L S S Q Q P G S - - - - - - - S A S H L M N L Q A - - - - - - - - - - - - - - - L S
pt038999_POPTR_    Q L I I S Q N P N A H A L L L Q N P L Q T H H P H S L F S T - - - T A H H Q I S F T S P W D P P H H Q N P C S N N P L N
pt009533_POPTR_    - - - - - - - - - - - A I T V N P I L S S Q Q P G S - - - - - - - S A S H L I N L Q A - - - - - - - - - - - - - - - L S
 
AT1G55110.1     G P M K Q E E S Q H H Y Q - - - - - N I P P W L I S S N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P
pt007881_POPTR_    V K R E Q D Q N Q Y L F N P R P D - S I P P W L A C P P I G E A G P - - - - - - - - - - - - - - - - D Q S F L Q H G N P
pt001960_POPTR_    P V H I K P E T H N H F Q - - - - - - I P P L L Q E P P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P
pt007880_POPTR_    V K R E Q D Q N Q Y L F N P R P D - S I P P W L A C P P I G E A G P G P P Q I N L S S Q L F P A H L D Q S F L Q H G N P
pt038999_POPTR_    P V H I K P E T T G H F Q - - - - - - I P A S L L Q E P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P
pt009533_POPTR_    V K R E H D Q N Q H H F N P R P E Y S I P P W L V F P P I G D A G T G P P Q I N L S S Q L F P E N F N Q S F L Q H G N P
 
AT1G55110.1     N P N G N N G N L F P P V A S S V N T G R S S F P H P S P A M S A T A L L Q K A A Q M G S T K S T T P E - - - - - - - -
pt007881_POPTR_    S P N P T - - - V L P P F Q P S - - - - - - - - S T A S P H M S A T A L L Q K A A Q M G V T V S K P S P S P A T A A I L
pt001960_POPTR_    P A L P S H K G L L A S T F H S L S N A V T S - S A A S H H L S A T A L L Q K A A S V G A A Q T S V - - - - - - - - - -
pt007880_POPTR_    S P N P T - - - V L P P F Q P S - - - - - - - - S T A S P H M S A T A L L Q K A A Q M G V T V S K P S P S P A T A A I L
pt038999_POPTR_    L T M P S H K G L L A P T F Q S L S N A A T S - Q A S S H H L S A T A L L Q K A A S V G A T Q T S V - - - - - - - - - -
pt009533_POPTR_    S T N P T - - - V L P P F Q S A - - - - - - - - S T V S P H M S A T A L L Q K A A Q M G V T M S K P S P P A A A A A I L
 
AT1G55110.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007881_POPTR_    R P H Q G H M S D H Q N P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt001960_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007880_POPTR_    R P H Q G H M S D H Q N P G F G S T L P A T S T A N P G L F F T S R E E M G S G F G H G L A S L E D K A G T V T S G I M
pt038999_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt009533_POPTR_    R P H Q G H M S N - L N P G F S S T L P A V T S - - - G L F L S S R E G M G S G F G H G L V S F E N K A A A V T S G I M
 
AT1G55110.1     E E E R S S R S S Y N N L I T T T M A A M M T S P P E P G F - - - - - - - - - - - - - - - - - - - - - G F Q D Y Y - - -
pt007881_POPTR_    - - - - - - - - - - - - - V H D M M S S L S S A - - - S G F D G S S F D N E D F N G M L N P K R D S S N F Q E I L S K S
pt001960_POPTR_    - - - - - - - - G H S Q M T Q L D M G E L G S A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G Q V H - - -
pt007880_POPTR_    E Y L A A S D G G G T S L V H D M M S S L S S A - - - S G F D G S S F D N E D F N G M L N P K R D S S N F Q E I L S K S
pt038999_POPTR_    - - - - - - - - G H S H M T Q L D M G E L G S A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G Q V H - - -
pt009533_POPTR_    E H L A A S D A G G P S L V H D M M S S L S S A - - - S G F D G S S F D N E D F N G M L N P K R D G G N F Q E I L S K S
 
AT1G55110.1     - - - - - - - - - - - - - - M M N H Q H H G G G E A F N G G F V P G E E K N D V V D D G G G E T R D F L G L R S - - - -
pt007881_POPTR_    T E S R F I R S D - - - - - A A S G S H H G G G - - - - - - - - - - - - - N D G L - - - - - - T R D F L G L K A - - - -
pt001960_POPTR_    - - - - - - - - - - - - - - V N S A S H V A Q G P N Y N L N S L A T W Q K S D R L - - - - - - T R D F L G L T G - E C E
pt007880_POPTR_    T E S R F I R S D - - - - - A A S G S H H G G G - - - - - - - - - - - - - N D G L - - - - - - T R D F L G L K A - - - -
pt038999_POPTR_    - - - - - - - - - - - - - - V D S V S H V S Q G P S Y N L N S L A T W Q K S D R L - - - - - - T R D F L G L T A P E C G
pt009533_POPTR_    T E S Q F R R S D H D V R T S A V G S P H G G G - - - - - - - - - - - - - N D D L - - - - - - T R D F L G L K A - - - -
 
AT1G55110.1     - - - - - - - - - - - - - - - - - - - L M S H N E I L S F A N N L G N C L N T S A T E Q Q Q Q Q H S H Q D - - - - - - -
pt007881_POPTR_    - - - - - - - - - - - - - - - - - - - - F P H K D F L N L P A G F D H I - - - - - - - - S P S T Y G Q R N Q N L P P P W
pt001960_POPTR_    D H H G H A A S N S N G S S G G V N A S M N V R E I L T Y T G G V G F - - - - - - - - - H Q Q Q Y N E R D H S L L K P H
pt007880_POPTR_    - - - - - - - - - - - - - - - - - - - - F P H K D F L N L P A G F D H I - - - - - - - - S P S T Y G Q R N Q N L P P P W
pt038999_POPTR_    D H H G H A A S N A N G S - - - V N V S M N V R E I L T Y T G G V G F - - - - - - - - - H Q Q Q Y N E R D H S L L K P H
pt009533_POPTR_    - - - - - - - - - - - - - - - - - - - - F P H K D W L - - - - - - D H I - - - - - - - - N P S T Y G Q R N Q N L P P P W
 
AT1G55110.1     - - - - - - - - - - - - - - - - - - - - -
pt007881_POPTR_    Q G S S M D F Q L Y N K K - - - - - - - -
pt001960_POPTR_    G G - - - - F G F A Q P S A S K T W G D C
pt007880_POPTR_    Q G S S M D F Q L Y N K K - - - - - - - -
pt038999_POPTR_    G G - - - - F G F A Q P S A S E A W G D C
pt009533_POPTR_    Q G - - - - - - - - - - - - - - - - - - -
 
0