fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G55460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035056 not found in 400aa AT1G55460.1 1st_1st 0.793768545 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G55460.1     MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGQN
pt035056_POPTR_ MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGQN
                ************************************************************

AT1G55460.1     PTRVVDGYSEEFEQTFLDLMRRSHRFSRIAATVVYNEYINDRHHVHMNSTEWATLTEFIK
pt035056_POPTR_ PNRIIDGYSEEFENEFLDMMKRSHRFSRVAATVVYNEYIHDRHHIHMNSTQWATLTEFVK
                *.*::********: ***:*:*******:**********:****:*****:*******:*

AT1G55460.1     HLGKTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRVKSDLAEEEKQEREIQRQIERA
pt035056_POPTR_ YLGRTGKCKVDETPKGWFITYIDRDSETIFKENMKNKRVRADLAEEEKQEREIKKQIEKA
                :**:******:*****************:***.:*****::************::***:*

AT1G55460.1     AEKLNGGGGEGETSGNDEVVDDGD---DERKKDEDLRLKSGVKVGFALGGGVKQVATGKE
pt035056_POPTR_ ----------GELSVNNDGVESGDVDNGEVRPAKELKLDSGVKVGFAL--GLKSNNVGKD
                          ** * *:: *:.**   .* :  ::*:*.*********  *:*.  .**:

AT1G55460.1     RGE--SSKLLFGDEENDKVERGEKRKRSGDSGRSEKERRSALDELMKEEEKKKERMNRKD
pt035056_POPTR_ RGESSSSRLVF-EEVEDKERKMGRSKESSNGGKSGK---SALEELMKEEEKAKERSNRKD
                ***  **:*:* :* :** .:  : *.*.:.*:* *   ***:******** *** ****

AT1G55460.1     YWLFEGIIVKVMSKALAEKGYYKQKGVVKKVIDNYVGEIKMLDSKHVLRVDQKELETVLP
pt035056_POPTR_ YWLFEGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVAEIEMLESKHKLRVDQEELETVIP
                ****************************:****:**.**:**:*** *****:*****:*

AT1G55460.1     QIGGMVKIVNGAYRGSNARLLGVDTEKFCAKVQIEKGVYDGRVIKSIEYEDICKLA
pt035056_POPTR_ QIGGLVKIVNGAYRGSNARLLGVDTEKFCAKVQIEKGIYDGRVLKAVEYEDICKLA
                ****:********************************:*****:*::*********
BoxShade v3.31 C (beta, 970507) Output
AT1G55460.1     M G K N D F L T P K A I A N R I K A K G L Q K L R W Y C Q M C Q K Q C R D E N G F K C H C M S E S H Q R Q M Q V F G Q N
pt035056_POPTR_    M G K N D F L T P K A I A N R I K A K G L Q K L R W Y C Q M C Q K Q C R D E N G F K C H C M S E S H Q R Q M Q V F G Q N
 
AT1G55460.1     P T R V V D G Y S E E F E Q T F L D L M R R S H R F S R I A A T V V Y N E Y I N D R H H V H M N S T E W A T L T E F I K
pt035056_POPTR_    P N R I I D G Y S E E F E N E F L D M M K R S H R F S R V A A T V V Y N E Y I H D R H H I H M N S T Q W A T L T E F V K
 
AT1G55460.1     H L G K T G K C K V E E T P K G W F I T Y I D R D S E T L F K E R L K N K R V K S D L A E E E K Q E R E I Q R Q I E R A
pt035056_POPTR_    Y L G R T G K C K V D E T P K G W F I T Y I D R D S E T I F K E N M K N K R V R A D L A E E E K Q E R E I K K Q I E K A
 
AT1G55460.1     A E K L N G G G G E G E T S G N D E V V D D G D - - - D E R K K D E D L R L K S G V K V G F A L G G G V K Q V A T G K E
pt035056_POPTR_    - - - - - - - - - - G E L S V N N D G V E S G D V D N G E V R P A K E L K L D S G V K V G F A L - - G L K S N N V G K D
 
AT1G55460.1     R G E - - S S K L L F G D E E N D K V E R G E K R K R S G D S G R S E K E R R S A L D E L M K E E E K K K E R M N R K D
pt035056_POPTR_    R G E S S S S R L V F - E E V E D K E R K M G R S K E S S N G G K S G K - - - S A L E E L M K E E E K A K E R S N R K D
 
AT1G55460.1     Y W L F E G I I V K V M S K A L A E K G Y Y K Q K G V V K K V I D N Y V G E I K M L D S K H V L R V D Q K E L E T V L P
pt035056_POPTR_    Y W L F E G I I V K V M S K A L A E K G Y Y K Q K G V V R K V I D K Y V A E I E M L E S K H K L R V D Q E E L E T V I P
 
AT1G55460.1     Q I G G M V K I V N G A Y R G S N A R L L G V D T E K F C A K V Q I E K G V Y D G R V I K S I E Y E D I C K L A
pt035056_POPTR_    Q I G G L V K I V N G A Y R G S N A R L L G V D T E K F C A K V Q I E K G I Y D G R V L K A V E Y E D I C K L A
 
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