fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G55460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024519 GSTKMNLRLSLRLVGW in 367/429 AT1G55460.1 1st_1st 0.695845697 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G55460.1     -----------------MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKC
Sb024519_Sorbi1 LLSSFYYWCGSGGCSVAMGKHEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKC
                                 ***::**************************************

AT1G55460.1     HCMSESHQRQMQVFGQNPTRVVDGYSEEFEQTFLDLMRRSHRFSRIAATVVYNEYINDRH
Sb024519_Sorbi1 HCMSESHQRQMQVFGMAPDRVVEGFSEEFFESFLSLIRRAHRHSRVAATVVYNEYIADRH
                ***************  * ***:*:**** ::**.*:**:**.**:********** ***

AT1G55460.1     HVHMNSTEWATLTEFIKHLGKTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRVKSDL
Sb024519_Sorbi1 HVHMNSTRWATLTEFVKFLGREGYCKVEDTPKGWFMTYIDRDSEQAVKDRLKRKRIKSDM
                *******.*******:*.**: * ****:******:********  .*:***.**:***:

AT1G55460.1     AEEEKQEREIQRQIERAAEKL----NGGGGEGET-SGNDEVV---DDGDDERKKDEDLRL
Sb024519_Sorbi1 AEDERQERMIARQIERAQKSLSKPNDGDVAEGESESGSEEEYSGSDDDGEEREDDAKEAN
                **:*:*** * ****** :.*    :*. .***: **.:*     **..:**:.* .   

AT1G55460.1     KSGVKVGFALGGGVKQVATGKERG---ESSKLLFG-DEEND-----KVERGEKRKRSGDS
Sb024519_Sorbi1 KATGKIAIAL----QKAMPGPKVNPFEDKPKMKFGFDEEDDSGTQEKV-KDEVPKKKGKD
                *:  *:.:**    ::. .* : .   :..*: ** ***:*     ** :.*  *:.*..

AT1G55460.1     GRSEKERRSALDELMKEEEKKKERMNRKDYWLFEGIIVKVMSKALAEKGYYKQKGVVKKV
Sb024519_Sorbi1 VKAAEARRSALDELMKEEEKAKERSNRKDYWLCPGIVVKVMSKSLAEKGYYKQKGVVKKV
                 :: : ************** *** *******  **:******:****************

AT1G55460.1     IDNYVGEIKMLDSKHVLRVDQKELETVLPQIGGMVKIVNGAYRGSNARLLGVDTEKFCAK
Sb024519_Sorbi1 IDKYVGEIEMLESKHVLRVDQDELETVIPQIGGLVWIVNGAYRGSNARLLSVDTEKFCAK
                **:*****:**:*********.*****:*****:* **************.*********

AT1G55460.1     VQIEKGVYDGRVIKSIEYEDICKLA-
Sb024519_Sorbi1 VQVEKGLYDGKVLRAVEYEDICKISS
                **:***:***:*::::*******::
BoxShade v3.31 C (beta, 970507) Output
AT1G55460.1     - - - - - - - - - - - - - - - - - M G K N D F L T P K A I A N R I K A K G L Q K L R W Y C Q M C Q K Q C R D E N G F K C
Sb024519_Sorbi1    L L S S F Y Y W C G S G G C S V A M G K H E F L T P K A I A N R I K A K G L Q K L R W Y C Q M C Q K Q C R D E N G F K C
 
AT1G55460.1     H C M S E S H Q R Q M Q V F G Q N P T R V V D G Y S E E F E Q T F L D L M R R S H R F S R I A A T V V Y N E Y I N D R H
Sb024519_Sorbi1    H C M S E S H Q R Q M Q V F G M A P D R V V E G F S E E F F E S F L S L I R R A H R H S R V A A T V V Y N E Y I A D R H
 
AT1G55460.1     H V H M N S T E W A T L T E F I K H L G K T G K C K V E E T P K G W F I T Y I D R D S E T L F K E R L K N K R V K S D L
Sb024519_Sorbi1    H V H M N S T R W A T L T E F V K F L G R E G Y C K V E D T P K G W F M T Y I D R D S E Q A V K D R L K R K R I K S D M
 
AT1G55460.1     A E E E K Q E R E I Q R Q I E R A A E K L - - - - N G G G G E G E T - S G N D E V V - - - D D G D D E R K K D E D L R L
Sb024519_Sorbi1    A E D E R Q E R M I A R Q I E R A Q K S L S K P N D G D V A E G E S E S G S E E E Y S G S D D D G E E R E D D A K E A N
 
AT1G55460.1     K S G V K V G F A L G G G V K Q V A T G K E R G - - - E S S K L L F G - D E E N D - - - - - K V E R G E K R K R S G D S
Sb024519_Sorbi1    K A T G K I A I A L - - - - Q K A M P G P K V N P F E D K P K M K F G F D E E D D S G T Q E K V - K D E V P K K K G K D
 
AT1G55460.1     G R S E K E R R S A L D E L M K E E E K K K E R M N R K D Y W L F E G I I V K V M S K A L A E K G Y Y K Q K G V V K K V
Sb024519_Sorbi1    V K A A E A R R S A L D E L M K E E E K A K E R S N R K D Y W L C P G I V V K V M S K S L A E K G Y Y K Q K G V V K K V
 
AT1G55460.1     I D N Y V G E I K M L D S K H V L R V D Q K E L E T V L P Q I G G M V K I V N G A Y R G S N A R L L G V D T E K F C A K
Sb024519_Sorbi1    I D K Y V G E I E M L E S K H V L R V D Q D E L E T V I P Q I G G L V W I V N G A Y R G S N A R L L S V D T E K F C A K
 
AT1G55460.1     V Q I E K G V Y D G R V I K S I E Y E D I C K L A -
Sb024519_Sorbi1    V Q V E K G L Y D G K V L R A V E Y E D I C K I S S
 
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