fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G55460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005463 not found in 398aa AT1G55460.1 not_1st 0.747774480 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G55460.1     MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGQN
gm005463_Glyma0 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQN
                ****:*******************************************.******:****

AT1G55460.1     PTRVVDGYSEEFEQTFLDLMRRSHRFSRIAATVVYNEYINDRHHVHMNSTEWATLTEFIK
gm005463_Glyma0 PHRIVEGYSEEFESTFLEHMKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVK
                * *:*:*******.***: *:*******:***************:*****:*******:*

AT1G55460.1     HLGKTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRVKSDLAEEEKQEREIQRQIERA
gm005463_Glyma0 YLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEEKQEKEIRRQIEKA
                :**:*****************************:****:*:*:.:*****:**:****:*

AT1G55460.1     AEKLNGGGGEGETSGNDEVVDDGDDERKKDEDLRLKSGVKVGFALGG-GVKQVATGKERG
gm005463_Glyma0 EQMMQPPTSEA----------DQPSQVEPPRELNMEDGIKIGFSLGSTSAKPVV--KEKH
                 : ::   .*.          *  .: :  .:*.::.*:*:**:**. ..* *.  **: 

AT1G55460.1     ESSKLLFGDEENDKVERGE------KRKRSGDSGRSEKERRSALDELMKEEEKKKERMNR
gm005463_Glyma0 DASRVVF-DEGDEEKYNGRNPGNNLKRKESGGG-------KSALDEMMREEEKKKEKINR
                ::*:::* ** :::  .*.      ***.**..       :*****:*:*******::**

AT1G55460.1     KDYWLFEGIIVKVMSKALAEKGYYKQKGVVKKVIDNYVGEIKMLDSKHVLRVDQKELETV
gm005463_Glyma0 KDYWLHEGIVVKVMSKVLAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETV
                *****.***:******.*************:****:*****:**:********* *****

AT1G55460.1     LPQIGGMVKIVNGAYRGSNARLLGVDTEKFCAKVQIEKGVYDGRVIKSIEYEDICKLA
gm005463_Glyma0 IPQVGGRVKIVNGAYRGSIAKLLGVDTDNFCAKVQIEKGAYDGRVLKSVEYEDICKVA
                :**:** *********** *:******::**********.*****:**:*******:*
BoxShade v3.31 C (beta, 970507) Output
AT1G55460.1     M G K N D F L T P K A I A N R I K A K G L Q K L R W Y C Q M C Q K Q C R D E N G F K C H C M S E S H Q R Q M Q V F G Q N
gm005463_Glyma0    M G K N E F L T P K A I A N R I K A K G L Q K L R W Y C Q M C Q K Q C R D E N G F K C H C M S E G H Q R Q M Q I F G Q N
 
AT1G55460.1     P T R V V D G Y S E E F E Q T F L D L M R R S H R F S R I A A T V V Y N E Y I N D R H H V H M N S T E W A T L T E F I K
gm005463_Glyma0    P H R I V E G Y S E E F E S T F L E H M K R S H R F S R V A A T V V Y N E Y I N D R H H I H M N S T Q W A T L T E F V K
 
AT1G55460.1     H L G K T G K C K V E E T P K G W F I T Y I D R D S E T L F K E R L K N K R V K S D L A E E E K Q E R E I Q R Q I E R A
gm005463_Glyma0    Y L G R T G K C K V E E T P K G W F I T Y I D R D S E T L F K E R M K N K R I K A D M V D E E K Q E K E I R R Q I E K A
 
AT1G55460.1     A E K L N G G G G E G E T S G N D E V V D D G D D E R K K D E D L R L K S G V K V G F A L G G - G V K Q V A T G K E R G
gm005463_Glyma0    E Q M M Q P P T S E A - - - - - - - - - - D Q P S Q V E P P R E L N M E D G I K I G F S L G S T S A K P V V - - K E K H
 
AT1G55460.1     E S S K L L F G D E E N D K V E R G E - - - - - - K R K R S G D S G R S E K E R R S A L D E L M K E E E K K K E R M N R
gm005463_Glyma0    D A S R V V F - D E G D E E K Y N G R N P G N N L K R K E S G G G - - - - - - - K S A L D E M M R E E E K K K E K I N R
 
AT1G55460.1     K D Y W L F E G I I V K V M S K A L A E K G Y Y K Q K G V V K K V I D N Y V G E I K M L D S K H V L R V D Q K E L E T V
gm005463_Glyma0    K D Y W L H E G I V V K V M S K V L A E K G Y Y K Q K G V V R K V I D K Y V G E I E M L E S K H V L R V D Q A E L E T V
 
AT1G55460.1     L P Q I G G M V K I V N G A Y R G S N A R L L G V D T E K F C A K V Q I E K G V Y D G R V I K S I E Y E D I C K L A
gm005463_Glyma0    I P Q V G G R V K I V N G A Y R G S I A K L L G V D T D N F C A K V Q I E K G A Y D G R V L K S V E Y E D I C K V A
 
0