fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G55460.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm038740 not found in 398aa AT1G55460.1 1st_1st 0.755192878 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G55460.1     MGKNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGQN
gm038740_Glyma1 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQN
                ****:*******************************************.******:****

AT1G55460.1     PTRVVDGYSEEFEQTFLDLMRRSHRFSRIAATVVYNEYINDRHHVHMNSTEWATLTEFIK
gm038740_Glyma1 PHRIVEGYSEEFETTFLEHMKRSHRFSRVAATVVYNEYINDRHHVHMNSTQWATLTEFVK
                * *:*:******* ***: *:*******:*********************:*******:*

AT1G55460.1     HLGKTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRVKSDLAEEEKQEREIQRQIERA
gm038740_Glyma1 YLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEEKQEKEIRRQIEKA
                :**:*****************************:****:*:*:.:*****:**:****:*

AT1G55460.1     AEKLNGGGGEGETSGNDEVVDDGDDERKKDEDLRLKSGVKVGFALGGGVKQVATGKERGE
gm038740_Glyma1 EQMMQPATSEADQPSQVEPL----------RELNMEDGIKIGFSLGSSLAKPVV-KEKHE
                 : :: . .*.: ..: * :          .:*.::.*:*:**:**..: : .. **: *

AT1G55460.1     SSKLLF--GDEE--NDKVERGE-KRKRSGDSGRSEKERRSALDELMKEEEKKKERMNRKD
gm038740_Glyma1 ASRVVFDEGEEEKYNERNPRNNLKRKESGGG-------KSALDEMMREEEKKKEKINRKD
                :*:::*  *:**  *::  *.: ***.**..       :*****:*:*******::****

AT1G55460.1     YWLFEGIIVKVMSKALAEKGYYKQKGVVKKVIDNYVGEIKMLDSKHVLRVDQKELETVLP
gm038740_Glyma1 YWLHEGIVVKVMSKVLAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETVIP
                ***.***:******.*************:****:*****:**:********* *****:*

AT1G55460.1     QIGGMVKIVNGAYRGSNARLLGVDTEKFCAKVQIEKGVYDGRVIKSIEYEDICKLA
gm038740_Glyma1 QVGGRVKIVNGAYRGSIAKLLGVDTDNFCAKVHIEKGVYDGRVLKAVEYEDICKVA
                *:** *********** *:******::*****:**********:*::*******:*
BoxShade v3.31 C (beta, 970507) Output
AT1G55460.1     M G K N D F L T P K A I A N R I K A K G L Q K L R W Y C Q M C Q K Q C R D E N G F K C H C M S E S H Q R Q M Q V F G Q N
gm038740_Glyma1    M G K N E F L T P K A I A N R I K A K G L Q K L R W Y C Q M C Q K Q C R D E N G F K C H C M S E G H Q R Q M Q I F G Q N
 
AT1G55460.1     P T R V V D G Y S E E F E Q T F L D L M R R S H R F S R I A A T V V Y N E Y I N D R H H V H M N S T E W A T L T E F I K
gm038740_Glyma1    P H R I V E G Y S E E F E T T F L E H M K R S H R F S R V A A T V V Y N E Y I N D R H H V H M N S T Q W A T L T E F V K
 
AT1G55460.1     H L G K T G K C K V E E T P K G W F I T Y I D R D S E T L F K E R L K N K R V K S D L A E E E K Q E R E I Q R Q I E R A
gm038740_Glyma1    Y L G R T G K C K V E E T P K G W F I T Y I D R D S E T L F K E R M K N K R I K A D M V D E E K Q E K E I R R Q I E K A
 
AT1G55460.1     A E K L N G G G G E G E T S G N D E V V D D G D D E R K K D E D L R L K S G V K V G F A L G G G V K Q V A T G K E R G E
gm038740_Glyma1    E Q M M Q P A T S E A D Q P S Q V E P L - - - - - - - - - - R E L N M E D G I K I G F S L G S S L A K P V V - K E K H E
 
AT1G55460.1     S S K L L F - - G D E E - - N D K V E R G E - K R K R S G D S G R S E K E R R S A L D E L M K E E E K K K E R M N R K D
gm038740_Glyma1    A S R V V F D E G E E E K Y N E R N P R N N L K R K E S G G G - - - - - - - K S A L D E M M R E E E K K K E K I N R K D
 
AT1G55460.1     Y W L F E G I I V K V M S K A L A E K G Y Y K Q K G V V K K V I D N Y V G E I K M L D S K H V L R V D Q K E L E T V L P
gm038740_Glyma1    Y W L H E G I V V K V M S K V L A E K G Y Y K Q K G V V R K V I D K Y V G E I E M L E S K H V L R V D Q A E L E T V I P
 
AT1G55460.1     Q I G G M V K I V N G A Y R G S N A R L L G V D T E K F C A K V Q I E K G V Y D G R V I K S I E Y E D I C K L A
gm038740_Glyma1    Q V G G R V K I V N G A Y R G S I A K L L G V D T D N F C A K V H I E K G V Y D G R V L K A V E Y E D I C K V A
 
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