fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G56010.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036291 not found in 302aa AT1G56010.2 1st_1st 0.550847457 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G56010.2     METEEEMKESSISMVEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKC
pt036291_POPTR_ --------MSNISFVEAKLPPGFRFHPRDEELVCDYLMKKASHCD---SLLMIEVDLNKC
                         *.**:*************:*:********::: * :   .*::*:******

AT1G56010.2     EPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMR
pt036291_POPTR_ EPWDIPETACVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRHILRKGTLVGMR
                ******: ******:**********************:********** *****.*****

AT1G56010.2     KTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHKNTEGVICRD
pt036291_POPTR_ KTLVFYQGRAPKGKKTDWVMHEFRLEGPLGQPK--TSSEKEDWVLCRVFYKNTREVVAKP
                ***********:*:***********:*.   *:   ** **********:***. *:.: 

AT1G56010.2     NMGSCFDETASASLPPLMDPYINFDQ-EPSSYLSDDHHYIINEHVPCFSNLSQNQTLNSN
pt036291_POPTR_ SIRSCYDDTGSSSLPALMDSYITFDQTQPN---LDEH-----EQVPCFSIFSQIQT-NQN
                .: **:*:*.*:***.***.**.*** :*.    *:*     *:***** :** ** *.*

AT1G56010.2     LTNSVSELKI---PCKNPNPLFTGGSASATLTGLDSFCSSDQMVLRALLSQLTKIDGSLG
pt036291_POPTR_ FP-YITQMEVPNLPTKGTGPF---GQVPMNITTHSDAFSCDTKVLKAVLNHFNMMESNAN
                :.  ::::::   * *...*:   *... .:*  ..  *.*  **:*:*.::. ::.. .

AT1G56010.2     PKESQSYGEGSSESLLTDIGIPSTVWNC-
pt036291_POPTR_ IKGSPSLGEGSSESYLSDVGMPN-LWNHY
                 * * * ******* *:*:*:*. :**
BoxShade v3.31 C (beta, 970507) Output
AT1G56010.2     M E T E E E M K E S S I S M V E A K L P P G F R F H P K D D E L V C D Y L M R R S L H N N H R P P L V L I Q V D L N K C
pt036291_POPTR_    - - - - - - - - M S N I S F V E A K L P P G F R F H P R D E E L V C D Y L M K K A S H C D - - - S L L M I E V D L N K C
 
AT1G56010.2     E P W D I P K M A C V G G K D W Y F Y S Q R D R K Y A T G L R T N R A T A T G Y W K A T G K D R T I L R K G K L V G M R
pt036291_POPTR_    E P W D I P E T A C V G G K E W Y F Y S Q R D R K Y A T G L R T N R A T A S G Y W K A T G K D R H I L R K G T L V G M R
 
AT1G56010.2     K T L V F Y Q G R A P R G R K T D W V M H E F R L Q G S H H P P N H S L S S P K E D W V L C R V F H K N T E G V I C R D
pt036291_POPTR_    K T L V F Y Q G R A P K G K K T D W V M H E F R L E G P L G Q P K - - T S S E K E D W V L C R V F Y K N T R E V V A K P
 
AT1G56010.2     N M G S C F D E T A S A S L P P L M D P Y I N F D Q - E P S S Y L S D D H H Y I I N E H V P C F S N L S Q N Q T L N S N
pt036291_POPTR_    S I R S C Y D D T G S S S L P A L M D S Y I T F D Q T Q P N - - - L D E H - - - - - E Q V P C F S I F S Q I Q T - N Q N
 
AT1G56010.2     L T N S V S E L K I - - - P C K N P N P L F T G G S A S A T L T G L D S F C S S D Q M V L R A L L S Q L T K I D G S L G
pt036291_POPTR_    F P - Y I T Q M E V P N L P T K G T G P F - - - G Q V P M N I T T H S D A F S C D T K V L K A V L N H F N M M E S N A N
 
AT1G56010.2     P K E S Q S Y G E G S S E S L L T D I G I P S T V W N C -
pt036291_POPTR_    I K G S P S L G E G S S E S Y L S D V G M P N - L W N H Y
 
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