fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G56010.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021624 not found in 302aa AT1G56010.2 1st_1st 0.538983050 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G56010.2     METEEEMKESSISMVEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKC
gm021624_Glyma0 --------MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVQHND---SLLLIDVDLNKC
                         *.****************:*:********::  **:   .*:**:******

AT1G56010.2     EPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMR
gm021624_Glyma0 EPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTHVGMR
                ******: ******:****:*****************:**********.*****. ****

AT1G56010.2     KTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHKNTEGVICRD
gm021624_Glyma0 KTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPK--ISSSKEDWVLCRVFYKNSE-VLAKP
                ***********:****:*******::*.* **:  :**.**********:**:* *:.: 

AT1G56010.2     NMGSCFDETASASLPPLMDPYINFDQEPSSYLSDDHHYIINEHVPCFSNLSQNQTLNSNL
gm021624_Glyma0 SMGSCYEDTGSSTLPALMDSYISFDQTQTH--ADEF-----EQVPCFSIFSQNQT--NPI
                .****:::*.*::**.***.**.***  :   :*:.     *:***** :*****  . :

AT1G56010.2     TNSVSELKIPCKNPNPLFTGGSASATLTGLDS--FC----SSDQMVLRALLSQLTK----
gm021624_Glyma0 FNHMTTME-------PKFPLNHATTTYGGAPNLGYCLDPLSCDRKMLKAVLNQITKMERN
                 * :: ::       * *. . *::*  *  .  :*    *.*: :*:*:*.*:**    

AT1G56010.2     -IDGSLGPKESQSYGEGSSESLLTDIGIPSTVWNC
gm021624_Glyma0 PLNQSL--KGSPSLGEGSSESYLSEVGMPH-VWNY
                 :: **  * * * ******* *:::*:*  ***
BoxShade v3.31 C (beta, 970507) Output
AT1G56010.2     M E T E E E M K E S S I S M V E A K L P P G F R F H P K D D E L V C D Y L M R R S L H N N H R P P L V L I Q V D L N K C
gm021624_Glyma0    - - - - - - - - M S N I S M V E A K L P P G F R F H P R D E E L V C D Y L M K K V Q H N D - - - S L L L I D V D L N K C
 
AT1G56010.2     E P W D I P K M A C V G G K D W Y F Y S Q R D R K Y A T G L R T N R A T A T G Y W K A T G K D R T I L R K G K L V G M R
gm021624_Glyma0    E P W D I P E T A C V G G K E W Y F Y T Q R D R K Y A T G L R T N R A T A S G Y W K A T G K D R P I L R K G T H V G M R
 
AT1G56010.2     K T L V F Y Q G R A P R G R K T D W V M H E F R L Q G S H H P P N H S L S S P K E D W V L C R V F H K N T E G V I C R D
gm021624_Glyma0    K T L V F Y Q G R A P K G R K T E W V M H E F R I E G P H G P P K - - I S S S K E D W V L C R V F Y K N S E - V L A K P
 
AT1G56010.2     N M G S C F D E T A S A S L P P L M D P Y I N F D Q E P S S Y L S D D H H Y I I N E H V P C F S N L S Q N Q T L N S N L
gm021624_Glyma0    S M G S C Y E D T G S S T L P A L M D S Y I S F D Q T Q T H - - A D E F - - - - - E Q V P C F S I F S Q N Q T - - N P I
 
AT1G56010.2     T N S V S E L K I P C K N P N P L F T G G S A S A T L T G L D S - - F C - - - - S S D Q M V L R A L L S Q L T K - - - -
gm021624_Glyma0    F N H M T T M E - - - - - - - P K F P L N H A T T T Y G G A P N L G Y C L D P L S C D R K M L K A V L N Q I T K M E R N
 
AT1G56010.2     - I D G S L G P K E S Q S Y G E G S S E S L L T D I G I P S T V W N C
gm021624_Glyma0    P L N Q S L - - K G S P S L G E G S S E S Y L S E V G M P H - V W N Y
 
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