fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G56170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000315 not found in 266aa AT1G56170.2 1st_not 0.708196721 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G56170.1     MEQSEEG------QQQQQQGVMDYVPPHA--------YQSGPV-----------------
pt000315_POPTR_ MDQSEQTQQQQSQQQQQQQPVMGVAASAGQVAYASTPYQTAPMVASGTPSIAIPSQTQPP
                *:***:       ****** **. ... .        **:.*:                 

AT1G56170.1     ----NAASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKI
pt000315_POPTR_ ATFSNSPHQLTYQQAQHFHH---QQQQQQLQMFWTNQMHEIEQTTDFKNHSLPLARIKKI
                    *:. ::::***:****   ***********:***:***:*******:*********

AT1G56170.1     MKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVF
pt000315_POPTR_ MKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVF
                ********************************:***************************

AT1G56170.1     DFLVDIIPRDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ-----GMMQH--------
pt000315_POPTR_ DFLVDIIPRDELKEEGLGVTKSTIP-VVGSPADLPYYYVPQHPVGPPGMIMGNPVDQAAT
                *********************.*** *****   ****: *:     **:          

AT1G56170.1     --------------W--PQEQHPDES----
pt000315_POPTR_ YGAQQPRPPMAFMPWPQPQPQQPQQRQSDT
                              *  ** *:*::
BoxShade v3.31 C (beta, 970507) Output
AT1G56170.1     M E Q S E E G - - - - - - Q Q Q Q Q Q G V M D Y V P P H A - - - - - - - - Y Q S G P V - - - - - - - - - - - - - - - - -
pt000315_POPTR_    M D Q S E Q T Q Q Q Q S Q Q Q Q Q Q Q P V M G V A A S A G Q V A Y A S T P Y Q T A P M V A S G T P S I A I P S Q T Q P P
 
AT1G56170.1     - - - - N A A S H M A F Q Q A H H F H H H H Q Q Q Q Q Q Q L Q M F W A N Q M Q E I E H T T D F K N H T L P L A R I K K I
pt000315_POPTR_    A T F S N S P H Q L T Y Q Q A Q H F H H - - - Q Q Q Q Q Q L Q M F W T N Q M H E I E Q T T D F K N H S L P L A R I K K I
 
AT1G56170.1     M K A D E D V R M I S A E A P V I F A K A C E M F I L E L T L R A W I H T E E N K R R T L Q K N D I A A A I S R T D V F
pt000315_POPTR_    M K A D E D V R M I S A E A P V I F A K A C E M F I L E L T L R S W I H T E E N K R R T L Q K N D I A A A I S R T D V F
 
AT1G56170.1     D F L V D I I P R D E L K E E G L G V T K G T I P S V V G S P - - - P Y Y Y L Q Q Q - - - - - G M M Q H - - - - - - - -
pt000315_POPTR_    D F L V D I I P R D E L K E E G L G V T K S T I P - V V G S P A D L P Y Y Y V P Q H P V G P P G M I M G N P V D Q A A T
 
AT1G56170.1     - - - - - - - - - - - - - - W - - P Q E Q H P D E S - - - -
pt000315_POPTR_    Y G A Q Q P R P P M A F M P W P Q P Q P Q Q P Q Q R Q S D T
 
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