fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G56170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015279 not found in 253aa AT1G56170.2 1st_not 0.662295081 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G56170.1     MEQSEEGQQQQQQGVMDY-----------------VPPHAYQS------GPVNAASHMAF
Sb015279_Sorbi1 MEPSSQPQPVMGVGSQPYPAAASYAAPTMVAGAPAVPPGSQPAAQFPNPAQLSAQHQMVY
                ** *.: *     *   *                 *** :  :      . :.*  :*.:

AT1G56170.1     QQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISA
Sb015279_Sorbi1 QQAQQFHHQLQQQQQQQLREFWTTQMDEIEQTTDFKNHTLPLARIKKIMKADEDVRMISA
                ***::***: ********: **:.**:***:*****************************

AT1G56170.1     EAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDEL
Sb015279_Sorbi1 EAPVVFAKACEVFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIIPRDEM
                ****:******:********:*:*******************:***::***********:

AT1G56170.1     KEEGLGVTKGTIPSVVGSP------PYYYL---------------QQQGMMQHWPQEQHP
Sb015279_Sorbi1 KEEGLGLPRVGLPPAMGAPADHSSYPYYYVPAQQVPGAGMMYGGQQGQPMTYMWQKPQVP
                ******:.:  :*..:*:*      ****:               * * *   * : * *

AT1G56170.1     DES----------
Sb015279_Sorbi1 EEEPSEEQQQQSP
                :*.
BoxShade v3.31 C (beta, 970507) Output
AT1G56170.1     M E Q S E E G Q Q Q Q Q Q G V M D Y - - - - - - - - - - - - - - - - - V P P H A Y Q S - - - - - - G P V N A A S H M A F
Sb015279_Sorbi1    M E P S S Q P Q P V M G V G S Q P Y P A A A S Y A A P T M V A G A P A V P P G S Q P A A Q F P N P A Q L S A Q H Q M V Y
 
AT1G56170.1     Q Q A H H F H H H H Q Q Q Q Q Q Q L Q M F W A N Q M Q E I E H T T D F K N H T L P L A R I K K I M K A D E D V R M I S A
Sb015279_Sorbi1    Q Q A Q Q F H H Q L Q Q Q Q Q Q Q L R E F W T T Q M D E I E Q T T D F K N H T L P L A R I K K I M K A D E D V R M I S A
 
AT1G56170.1     E A P V I F A K A C E M F I L E L T L R A W I H T E E N K R R T L Q K N D I A A A I S R T D V F D F L V D I I P R D E L
Sb015279_Sorbi1    E A P V V F A K A C E V F I L E L T L R S W M H T E E N K R R T L Q K N D I A A A I T R T D I Y D F L V D I I P R D E M
 
AT1G56170.1     K E E G L G V T K G T I P S V V G S P - - - - - - P Y Y Y L - - - - - - - - - - - - - - - Q Q Q G M M Q H W P Q E Q H P
Sb015279_Sorbi1    K E E G L G L P R V G L P P A M G A P A D H S S Y P Y Y Y V P A Q Q V P G A G M M Y G G Q Q G Q P M T Y M W Q K P Q V P
 
AT1G56170.1     D E S - - - - - - - - - -
Sb015279_Sorbi1    E E E P S E E Q Q Q Q S P
 
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