fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G56170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021542 not found in 271aa AT1G56170.2 1st_not 0.685245901 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G56170.1     MEQSEEGQQQQQQ-----GVMDYVPPHAYQS------------------GPVNA------
gm021542_Glyma0 MDKSEQTQQQQQQQQHVMGVAAGASQMAYSSHYPTASMVASGTPAVTAPSPTQAPAAFSS
                *::**: ******     **   ..  **.*                  .*.:*      

AT1G56170.1     -ASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADE
gm021542_Glyma0 SAHQLAYQQAQHFHHQQQQHQQQQLQMFWSNQMQEIEQTIDFKNHSLPLARIKKIMKADE
                 * ::*:***:****::**:*********:*******:* *****:**************

AT1G56170.1     DVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVD
gm021542_Glyma0 DVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFLVD
                ***************************:***********************.********

AT1G56170.1     IIPRDELKEEGLGVTKGTIPSVVGSP---PYYYL--------------------------
gm021542_Glyma0 IIPRDELKEEGLGITKATIP-LVGSPADMPYYYVPPQHPVVGPPGMIMGKPIGAEQATLY
                *************:**.*** :****   ****:                          

AT1G56170.1     --QQ-------------QGMMQHWPQEQHPDES
gm021542_Glyma0 STQQPRPPVAFMPWPHTQPLQQQPPQHQQTDS-
                  **             * : *: **.*:.*.
BoxShade v3.31 C (beta, 970507) Output
AT1G56170.1     M E Q S E E G Q Q Q Q Q Q - - - - - G V M D Y V P P H A Y Q S - - - - - - - - - - - - - - - - - - G P V N A - - - - - -
gm021542_Glyma0    M D K S E Q T Q Q Q Q Q Q Q Q H V M G V A A G A S Q M A Y S S H Y P T A S M V A S G T P A V T A P S P T Q A P A A F S S
 
AT1G56170.1     - A S H M A F Q Q A H H F H H H H Q Q Q Q Q Q Q L Q M F W A N Q M Q E I E H T T D F K N H T L P L A R I K K I M K A D E
gm021542_Glyma0    S A H Q L A Y Q Q A Q H F H H Q Q Q Q H Q Q Q Q L Q M F W S N Q M Q E I E Q T I D F K N H S L P L A R I K K I M K A D E
 
AT1G56170.1     D V R M I S A E A P V I F A K A C E M F I L E L T L R A W I H T E E N K R R T L Q K N D I A A A I S R T D V F D F L V D
gm021542_Glyma0    D V R M I S A E A P V I F A K A C E M F I L E L T L R S W I H T E E N K R R T L Q K N D I A A A I S R N D V F D F L V D
 
AT1G56170.1     I I P R D E L K E E G L G V T K G T I P S V V G S P - - - P Y Y Y L - - - - - - - - - - - - - - - - - - - - - - - - - -
gm021542_Glyma0    I I P R D E L K E E G L G I T K A T I P - L V G S P A D M P Y Y Y V P P Q H P V V G P P G M I M G K P I G A E Q A T L Y
 
AT1G56170.1     - - Q Q - - - - - - - - - - - - - Q G M M Q H W P Q E Q H P D E S
gm021542_Glyma0    S T Q Q P R P P V A F M P W P H T Q P L Q Q Q P P Q H Q Q T D S -
 
0