fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G57560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os001540 not found in 428aa AT1G09540.1 1st_not 0.444067796 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G57560.1     MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINY
Os001540_Os01t0 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY
                * ***********************:*:**********:*******:*************

AT1G57560.1     LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG
Os001540_Os01t0 LRPDLKRGAFSQEEEDLIVELHAVLGNRWSQIATRLPGRTDNEIKNLWNSCIKKKLRQKG
                ***********.**::*****************:********************** :**

AT1G57560.1     IDPITHKPLSEVGK-ETNRSDNNNSTSFSSET---------NQDLFVKKTSDFAEYSAFQ
Os001540_Os01t0 IDPNTHKPLAEVDRSKATPTISNDRTSESSDVDPSSGVALHNLSHLLSETAQSSELLPVK
                *** *****:**.: ::. : .*: ** **:.         * . ::.:*:: :*  ..:

AT1G57560.1     KEESNSVSLRNSLSSMIPTQFNID--------------DGSVSNAGFDTQVC--------
Os001540_Os01t0 VTKPRTQAPGLARLKVPPKELFLDQLTSGHENLPSCRSSGPIPNFPFQQLLCYNNDFNSM
                  :..: :   :  .: *.:: :*              .*.:.*  *:  :*        

AT1G57560.1     --------------------------VKPSII-----LLPPPNNTSSTVSGQDHVNVSEP
Os001540_Os01t0 DVGNRNSLWYNQNESSSSTISTVMPPVSPSTLSTSTGLNPSPDNANSRGTG---IHNSQF
                                          *.** :     * *.*:*:.*  :*   :: *: 

AT1G57560.1     NWESN----SGTTSHLNNPGM--------------------------------EEMKWSE
Os001540_Os01t0 YWDTNNPSSSSSTGSSGNNGLGFELQSTSSLLETNIFPWSDLAPEKDSQAQLEEELKWPD
                 *::*    *.:*.  .* *:                                **:**.:

AT1G57560.1     -------------EYLNESLFSTQVYVKSETDFN-SNIAFPWSQSQ--------ACDVFP
Os001540_Os01t0 LLHGTFSEMPAPMQNLSQSLYED--VVKAESQFNMEGLCAAWSQNLLPQQHLPVVSDMYD
                             : *.:**:.    **:*::** ..:. .***.         ..*:: 

AT1G57560.1     KDLQRMAFSFGGQTL
Os001540_Os01t0 KDLQRMSLSFENI--
                ******::** .
BoxShade v3.31 C (beta, 970507) Output
AT1G57560.1     M K R H S C C Y K Q K L R K G L W S P E E D E K L L N Y I T K H G H G C W S S V P K L A G L E R C G K S C R L R W I N Y
Os001540_Os01t0    M G R H S C C Y K Q K L R K G L W S P E E D E K L M N H I T K H G H G C W S T V P K L A G L Q R C G K S C R L R W I N Y
 
AT1G57560.1     L R P D L K R G A F S S E E Q N L I V E L H A V L G N R W S Q I A A R L P G R T D N E I K N L W N S C I K K K L M K K G
Os001540_Os01t0    L R P D L K R G A F S Q E E E D L I V E L H A V L G N R W S Q I A T R L P G R T D N E I K N L W N S C I K K K L R Q K G
 
AT1G57560.1     I D P I T H K P L S E V G K - E T N R S D N N N S T S F S S E T - - - - - - - - - N Q D L F V K K T S D F A E Y S A F Q
Os001540_Os01t0    I D P N T H K P L A E V D R S K A T P T I S N D R T S E S S D V D P S S G V A L H N L S H L L S E T A Q S S E L L P V K
 
AT1G57560.1     K E E S N S V S L R N S L S S M I P T Q F N I D - - - - - - - - - - - - - - D G S V S N A G F D T Q V C - - - - - - - -
Os001540_Os01t0    V T K P R T Q A P G L A R L K V P P K E L F L D Q L T S G H E N L P S C R S S G P I P N F P F Q Q L L C Y N N D F N S M
 
AT1G57560.1     - - - - - - - - - - - - - - - - - - - - - - - - - - V K P S I I - - - - - L L P P P N N T S S T V S G Q D H V N V S E P
Os001540_Os01t0    D V G N R N S L W Y N Q N E S S S S T I S T V M P P V S P S T L S T S T G L N P S P D N A N S R G T G - - - I H N S Q F
 
AT1G57560.1     N W E S N - - - - S G T T S H L N N P G M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E E M K W S E
Os001540_Os01t0    Y W D T N N P S S S S S T G S S G N N G L G F E L Q S T S S L L E T N I F P W S D L A P E K D S Q A Q L E E E L K W P D
 
AT1G57560.1     - - - - - - - - - - - - - E Y L N E S L F S T Q V Y V K S E T D F N - S N I A F P W S Q S Q - - - - - - - - A C D V F P
Os001540_Os01t0    L L H G T F S E M P A P M Q N L S Q S L Y E D - - V V K A E S Q F N M E G L C A A W S Q N L L P Q Q H L P V V S D M Y D
 
AT1G57560.1     K D L Q R M A F S F G G Q T L
Os001540_Os01t0    K D L Q R M S L S F E N I - -
 
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