fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G57560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025078 not found in 599aa AT1G09540.1 not_not 0.437288135 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G57560.1     -------------------------MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHG
Sb025078_Sorbi1 RIPCCSSSCELCRLQSSASVSALLSMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHG
                                         * ***********************:*:*******

AT1G57560.1     CWSSVPKLAGLERCGKSCRLRWINYLRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAAR
Sb025078_Sorbi1 CWSTVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIATR
                ***:*******:************************.**::**:**************:*

AT1G57560.1     LPGRTDNEIKNLWNSCIKKKLMKKGIDPITHKPLSEV----------GKETNRSDN----
Sb025078_Sorbi1 LPGRTDNEIKNLWNSSIKKKLRQKGIDPNTHKPLAEVEHSKAAPTISTERTSESSDVDPS
                ***************.***** :***** *****:**           :.*..*.:    

AT1G57560.1     -----NNSTSFSSETNQDLFV--------KKTSDFAEYSAFQKE---------ESNSVSL
Sb025078_Sorbi1 SGGALGNLSHLLSETAQSPELLPVLGKHRKETTSLAHLRVPPKELFLDQLVSGHENLTSC
                     .* : : *** *.  :        *:*:.:*.  .  **         ..* .* 

AT1G57560.1     RNSLSSMIP-----------TQFNIDDGSVSNAGFDTQVCVKPSII--LLPP--PNNTSS
Sb025078_Sorbi1 RS--TGPIPNFPFQQLMCYNNEFGHKNGGSNNSFWFNQNESSGSTISTVMPPVSPSTLST
                *.  :. **           .:*. .:*. .*: : .*   . * *  ::**  *.. *:

AT1G57560.1     TV----------SGQDHVNVSEPNWES----------NSGTTS-----------------
Sb025078_Sorbi1 STGLNGSPDNPHSGGTGIQNTQFYWETANPSSSSSRGSSGSNSLGFERQSTSSLLESSVF
                :.          **   :: ::  **:          .**:.*                 

AT1G57560.1     -------------HLNNPGMEEMKWSE-------------EYLNESLFSTQVYVKSETDF
Sb025078_Sorbi1 PWTDLTPDKNSQVHLE----EELKWPDLLHGTFTDTPATMQNLSQSLYED--VIKAESQF
                             **:    **:**.:             : *.:**:.    :*:*::*

AT1G57560.1     N-SNIAFPWSQSQ--------ACDVFPKDLQRMAFSFGGQTL
Sb025078_Sorbi1 NIEGLCAAWSQNLQPQQHLQVVSDLYDKDLQRMSLSFENI--
                * ..:. .***.         ..*:: ******::** .
BoxShade v3.31 C (beta, 970507) Output
AT1G57560.1     - - - - - - - - - - - - - - - - - - - - - - - - - M K R H S C C Y K Q K L R K G L W S P E E D E K L L N Y I T K H G H G
Sb025078_Sorbi1    R I P C C S S S C E L C R L Q S S A S V S A L L S M G R H S C C Y K Q K L R K G L W S P E E D E K L M N H I T K H G H G
 
AT1G57560.1     C W S S V P K L A G L E R C G K S C R L R W I N Y L R P D L K R G A F S S E E Q N L I V E L H A V L G N R W S Q I A A R
Sb025078_Sorbi1    C W S T V P K L A G L Q R C G K S C R L R W I N Y L R P D L K R G A F S Q E E E D L I I E L H A V L G N R W S Q I A T R
 
AT1G57560.1     L P G R T D N E I K N L W N S C I K K K L M K K G I D P I T H K P L S E V - - - - - - - - - - G K E T N R S D N - - - -
Sb025078_Sorbi1    L P G R T D N E I K N L W N S S I K K K L R Q K G I D P N T H K P L A E V E H S K A A P T I S T E R T S E S S D V D P S
 
AT1G57560.1     - - - - - N N S T S F S S E T N Q D L F V - - - - - - - - K K T S D F A E Y S A F Q K E - - - - - - - - - E S N S V S L
Sb025078_Sorbi1    S G G A L G N L S H L L S E T A Q S P E L L P V L G K H R K E T T S L A H L R V P P K E L F L D Q L V S G H E N L T S C
 
AT1G57560.1     R N S L S S M I P - - - - - - - - - - - T Q F N I D D G S V S N A G F D T Q V C V K P S I I - - L L P P - - P N N T S S
Sb025078_Sorbi1    R S - - T G P I P N F P F Q Q L M C Y N N E F G H K N G G S N N S F W F N Q N E S S G S T I S T V M P P V S P S T L S T
 
AT1G57560.1     T V - - - - - - - - - - S G Q D H V N V S E P N W E S - - - - - - - - - - N S G T T S - - - - - - - - - - - - - - - - -
Sb025078_Sorbi1    S T G L N G S P D N P H S G G T G I Q N T Q F Y W E T A N P S S S S S R G S S G S N S L G F E R Q S T S S L L E S S V F
 
AT1G57560.1     - - - - - - - - - - - - - H L N N P G M E E M K W S E - - - - - - - - - - - - - E Y L N E S L F S T Q V Y V K S E T D F
Sb025078_Sorbi1    P W T D L T P D K N S Q V H L E - - - - E E L K W P D L L H G T F T D T P A T M Q N L S Q S L Y E D - - V I K A E S Q F
 
AT1G57560.1     N - S N I A F P W S Q S Q - - - - - - - - A C D V F P K D L Q R M A F S F G G Q T L
Sb025078_Sorbi1    N I E G L C A A W S Q N L Q P Q Q H L Q V V S D L Y D K D L Q R M S L S F E N I - -
 
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