fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G57560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054125 not found in 428aa AT1G09540.1 1st_not 0.450847457 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G57560.1     MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINY
gm054125_Glyma2 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
                * ********************************************:*************

AT1G57560.1     LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG
gm054125_Glyma2 LRPDLKRGAFSQQEENMIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRG
                ***********.:*:*:*****************:****************:**** ::*

AT1G57560.1     IDPITHKPLSEVGKE-------TNRSDNN----------------------NSTS-----
gm054125_Glyma2 IDPNTHKPLSEVENEKDMMPPSTDKSTQKASVGSNEVSLVDHHQQQPKIMPNSSSERYPL
                *** ******** :*       *::* ::                      **:*     

AT1G57560.1     --FSSETNQDLFVKKTSDFAEYSAFQKEESNSVSLRNSLSSMIPTQFN---IDDGSVSN-
gm054125_Glyma2 EVSTTSSTQELFLDR---FGTPTTCHHHHNN-----NNTSDVVGSYFSFQHLNYGTTTNM
                   ::.:.*:**:.:   *.  :: ::...*     *. *.:: : *.   :: *:.:* 

AT1G57560.1     ---AGFDTQVCVKPSIILLPPPNNTSSTVS------GQDHV----NVSEP--------NW
gm054125_Glyma2 SLSANPNASLCFVPASTSSDLNNNSTITSSMLPSIFPTQHVKLQSNNNNPSISSDGVQNW
                   *. ::.:*. *:       **:: * *        :**    * .:*        **

AT1G57560.1     ES---NSGTTSHLNNPGM-------------------------------------EEMKW
gm054125_Glyma2 ETSNLNNSNSTNKNNGSMQLQSCTNFIDNTWGVGESMKVVNINKDADQMPLQAEQEDLKW
                *:   *...::: ** .*                                     *::**

AT1G57560.1     SEEYLNESLF-------------STQVY--VKSETDF-------------NSNIAFPWSQ
gm054125_Glyma2 S-EYLNTPFILGNNTAQNHQIHTSQSIYSEVKPETGFITDESCATWHHYQNQTPAF----
                * **** .::             * .:*  **.**.*             *.. **    

AT1G57560.1     SQACDVFPKDLQRMAFSFGGQTL
gm054125_Glyma2 -QLSDIYSKDLQRFSVTF-GQTL
                 * .*::.*****::.:* ****
BoxShade v3.31 C (beta, 970507) Output
AT1G57560.1     M K R H S C C Y K Q K L R K G L W S P E E D E K L L N Y I T K H G H G C W S S V P K L A G L E R C G K S C R L R W I N Y
gm054125_Glyma2    M G R H S C C Y K Q K L R K G L W S P E E D E K L L N Y I T K H G H G C W S S V P K L A G L Q R C G K S C R L R W I N Y
 
AT1G57560.1     L R P D L K R G A F S S E E Q N L I V E L H A V L G N R W S Q I A A R L P G R T D N E I K N L W N S C I K K K L M K K G
gm054125_Glyma2    L R P D L K R G A F S Q Q E E N M I V E L H A V L G N R W S Q I A A Q L P G R T D N E I K N L W N S C L K K K L R Q R G
 
AT1G57560.1     I D P I T H K P L S E V G K E - - - - - - - T N R S D N N - - - - - - - - - - - - - - - - - - - - - - N S T S - - - - -
gm054125_Glyma2    I D P N T H K P L S E V E N E K D M M P P S T D K S T Q K A S V G S N E V S L V D H H Q Q Q P K I M P N S S S E R Y P L
 
AT1G57560.1     - - F S S E T N Q D L F V K K T S D F A E Y S A F Q K E E S N S V S L R N S L S S M I P T Q F N - - - I D D G S V S N -
gm054125_Glyma2    E V S T T S S T Q E L F L D R - - - F G T P T T C H H H H N N - - - - - N N T S D V V G S Y F S F Q H L N Y G T T T N M
 
AT1G57560.1     - - - A G F D T Q V C V K P S I I L L P P P N N T S S T V S - - - - - - G Q D H V - - - - N V S E P - - - - - - - - N W
gm054125_Glyma2    S L S A N P N A S L C F V P A S T S S D L N N N S T I T S S M L P S I F P T Q H V K L Q S N N N N P S I S S D G V Q N W
 
AT1G57560.1     E S - - - N S G T T S H L N N P G M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E E M K W
gm054125_Glyma2    E T S N L N N S N S T N K N N G S M Q L Q S C T N F I D N T W G V G E S M K V V N I N K D A D Q M P L Q A E Q E D L K W
 
AT1G57560.1     S E E Y L N E S L F - - - - - - - - - - - - - S T Q V Y - - V K S E T D F - - - - - - - - - - - - - N S N I A F P W S Q
gm054125_Glyma2    S - E Y L N T P F I L G N N T A Q N H Q I H T S Q S I Y S E V K P E T G F I T D E S C A T W H H Y Q N Q T P A F - - - -
 
AT1G57560.1     S Q A C D V F P K D L Q R M A F S F G G Q T L
gm054125_Glyma2    - Q L S D I Y S K D L Q R F S V T F - G Q T L
 
0