fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G59640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041726 not found in 268aa AT1G59640.1 not_1st 0.500948766 II
Pt034245 not found in 200aa AT1G59640.1 not_1st 0.453510436 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G59640.1     ---MDPSGMMNEGGPFNLAEIWQFPLNGVS-----------TAGDSSRRS-FVGPNQFGD
pt034245_POPTR_ ---MDPPARMNEGGPYSLEEIWQFPINGSGRGHFDLLNLEQRAAASVRKH----------
pt041726_POPTR_ MIRMDPPAMMNEGGPYTLEEIWQFPINGSGRGQFELLNLERRAAASARKRREV------D
                   ***.. ******:.* ******:** .            *. * *:           

AT1G59640.1     ADLTTAANGDPARMSHALSQAVIEGISG--------AWKRREDESKSAKIVSTIGASEGE
pt034245_POPTR_ ------------------------------------------------------------
pt041726_POPTR_ LDVDDSSSSKPTTLSPTNANTNTNGLLNDCDGKRLKAWGSRDDNH--------------H
                                                                            

AT1G59640.1     NKRQKIDEVCDGKAEAE-SLGTETEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARR
pt034245_POPTR_ --------------EAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARR
pt041726_POPTR_ HQQQQQQQQHDSRSEAEPSSGKLVEHKPQPPEPPKQDYIHVRARRGQATDSHSLAERARR
                              *** * *. .*:* *  **.* ************************

AT1G59640.1     EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIE
pt034245_POPTR_ EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIE
pt041726_POPTR_ EKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFLSMKLEAVNLNMNPETE
                ************:******* ******************************* .***  *

AT1G59640.1     VFPPKEFGQQAFENPEIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS
pt034245_POPTR_ VFASKDFGQ-TFDTAGMAFGSQATREYSRGTSPEWLHMQVG-GGFERTS
pt041726_POPTR_ VFPSKDFGQHTFDTAGMAFGSQATREYNHCTSPEWLHMQVG-GGFQRTS
                **..*:*** :*:.. : ****:****.: :********:* ***:***
BoxShade v3.31 C (beta, 970507) Output
AT1G59640.1     - - - M D P S G M M N E G G P F N L A E I W Q F P L N G V S - - - - - - - - - - - T A G D S S R R S - F V G P N Q F G D
pt034245_POPTR_    - - - M D P P A R M N E G G P Y S L E E I W Q F P I N G S G R G H F D L L N L E Q R A A A S V R K H - - - - - - - - - -
pt041726_POPTR_    M I R M D P P A M M N E G G P Y T L E E I W Q F P I N G S G R G Q F E L L N L E R R A A A S A R K R R E V - - - - - - D
 
AT1G59640.1     A D L T T A A N G D P A R M S H A L S Q A V I E G I S G - - - - - - - - A W K R R E D E S K S A K I V S T I G A S E G E
pt034245_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt041726_POPTR_    L D V D D S S S S K P T T L S P T N A N T N T N G L L N D C D G K R L K A W G S R D D N H - - - - - - - - - - - - - - H
 
AT1G59640.1     N K R Q K I D E V C D G K A E A E - S L G T E T E Q K K Q Q M E P T K - D Y I H V R A R R G Q A T D S H S L A E R A R R
pt034245_POPTR_    - - - - - - - - - - - - - - E A E P S S G K H V E H K T Q P P E P S K Q D Y I H V R A R R G Q A T D S H S L A E R A R R
pt041726_POPTR_    H Q Q Q Q Q Q Q Q H D S R S E A E P S S G K L V E H K P Q P P E P P K Q D Y I H V R A R R G Q A T D S H S L A E R A R R
 
AT1G59640.1     E K I S E R M K I L Q D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A V N S R M N P G I E
pt034245_POPTR_    E K I S E R M K I L Q D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A V N T R M N P G I E
pt041726_POPTR_    E K I S E R M K I L Q D I V P G C N K V T G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A V N L N M N P E T E
 
AT1G59640.1     V F P P K E F G Q Q A F E N P E I Q F G S Q S T R E Y S R G A S P E W L H M Q I G S G G F E R T S
pt034245_POPTR_    V F A S K D F G Q - T F D T A G M A F G S Q A T R E Y S R G T S P E W L H M Q V G - G G F E R T S
pt041726_POPTR_    V F P S K D F G Q H T F D T A G M A F G S Q A T R E Y N H C T S P E W L H M Q V G - G G F Q R T S
 
0