fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G59640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034244 not found in 241aa AT1G59640.1 1st_1st 0.508538899 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G59640.1     MDPSGMMNEGGPFNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMS
pt034244_POPTR_ MDPPARMNEGGPYSLEEIWQFPING------SGRGHF---------DLLN----------
                ***.. ******:.* ******:**      *.*  *         ** .          

AT1G59640.1     HALSQAVIEGISGAWKRRE-----DESKSAKIVS-------TIGASEGENKRQKIDEVCD
pt034244_POPTR_ --LEQRAAASVR---KRRDVDLDVDDDSSSKPTTNGLLRLKTSGSKDEDHHRHH-----D
                  *.* .  .:    ***:     *:..*:* .:       * *:.: :::*::     *

AT1G59640.1     GKAEAE-SLGTETEQKKQQMEPTK-DYIHVRARRGQATDSHSLAERARREKISERMKILQ
pt034244_POPTR_ SKDEAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ
                .* *** * *...*:*.*  **:* ***********************************

AT1G59640.1     DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKEFGQQA
pt034244_POPTR_ DLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFASKDFG-QT
                *****************************************:*********..*:** *:

AT1G59640.1     FENPEIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS
pt034244_POPTR_ FDTAGMAFGSQATREYSRGTSPEWLHMQVG-GGFERTS
                *:.. : ****:*******:********:* *******
BoxShade v3.31 C (beta, 970507) Output
AT1G59640.1     M D P S G M M N E G G P F N L A E I W Q F P L N G V S T A G D S S R R S F V G P N Q F G D A D L T T A A N G D P A R M S
pt034244_POPTR_    M D P P A R M N E G G P Y S L E E I W Q F P I N G - - - - - - S G R G H F - - - - - - - - - D L L N - - - - - - - - - -
 
AT1G59640.1     H A L S Q A V I E G I S G A W K R R E - - - - - D E S K S A K I V S - - - - - - - T I G A S E G E N K R Q K I D E V C D
pt034244_POPTR_    - - L E Q R A A A S V R - - - K R R D V D L D V D D D S S S K P T T N G L L R L K T S G S K D E D H H R H H - - - - - D
 
AT1G59640.1     G K A E A E - S L G T E T E Q K K Q Q M E P T K - D Y I H V R A R R G Q A T D S H S L A E R A R R E K I S E R M K I L Q
pt034244_POPTR_    S K D E A E P S S G K H V E H K T Q P P E P S K Q D Y I H V R A R R G Q A T D S H S L A E R A R R E K I S E R M K I L Q
 
AT1G59640.1     D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A V N S R M N P G I E V F P P K E F G Q Q A
pt034244_POPTR_    D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A V N T R M N P G I E V F A S K D F G - Q T
 
AT1G59640.1     F E N P E I Q F G S Q S T R E Y S R G A S P E W L H M Q I G S G G F E R T S
pt034244_POPTR_    F D T A G M A F G S Q A T R E Y S R G T S P E W L H M Q V G - G G F E R T S
 
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