fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G59640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034244 not found in 241aa AT1G59640.1 1st_1st 0.508538899 Ia
Pt041726 not found in 268aa AT1G59640.1 not_1st 0.500948766 II
Pt034245 not found in 200aa AT1G59640.1 not_1st 0.453510436 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G59640.1     ---MDPSGMMNEGGPFNLAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPA
pt041726_POPTR_ MIRMDPPAMMNEGGPYTLEEIWQFPING------------SGRGQFELLNLERRA-----
pt034245_POPTR_ ---MDPPARMNEGGPYSLEEIWQFPING------------SGRGHFDLLNLEQRA-----
pt034244_POPTR_ ---MDPPARMNEGGPYSLEEIWQFPING------------SGRGHFDLLNLEQRA-----
                   ***.. ******:.* ******:**             * .:*   :*   *     

AT1G59640.1     RMSHALSQAVIEGISGAWKRRE-----DESKSAKIVS---------TIG-----------
pt041726_POPTR_ -------------AASARKRREVDLDVDDSSSSKPTTLSPTNANTNTNGLLNDCDGKRLK
pt034245_POPTR_ -------------AASVRKH----------------------------------------
pt034244_POPTR_ -------------AASVRKRRDVDLDVDDDSSSKPT----------TNGLL------RLK
                              :.. *:                                        

AT1G59640.1     --ASEGENKR---QKIDEVCDGKAEAE-SLGTETEQKKQQMEPTK-DYIHVRARRGQATD
pt041726_POPTR_ AWGSRDDNHHHQQQQQQQQHDSRSEAEPSSGKLVEHKPQPPEPPKQDYIHVRARRGQATD
pt034245_POPTR_ ------------------------EAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATD
pt034244_POPTR_ TSGSKDEDHH-------RHHDSKDEAEPSSGKHVEHKTQPPEPSKQDYIHVRARRGQATD
                                        *** * *. .*:* *  **.* **************

AT1G59640.1     SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
pt041726_POPTR_ SHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQVEFLSMKLEA
pt034245_POPTR_ SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
pt034244_POPTR_ SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA
                **********************:******* *****************************

AT1G59640.1     VNSRMNPGIEVFPPKEFGQQAFENPEIQFGSQSTREYSRGASPEWLHMQIGSGGFERTS
pt041726_POPTR_ VNLNMNPETEVFPSKDFGQHTFDTAGMAFGSQATREYNHCTSPEWLHMQVG-GGFQRTS
pt034245_POPTR_ VNTRMNPGIEVFASKDFGQ-TFDTAGMAFGSQATREYSRGTSPEWLHMQVG-GGFERTS
pt034244_POPTR_ VNTRMNPGIEVFASKDFGQ-TFDTAGMAFGSQATREYSRGTSPEWLHMQVG-GGFERTS
                ** .***  ***..*:*** :*:.. : ****:****.: :********:* ***:***
BoxShade v3.31 C (beta, 970507) Output
AT1G59640.1     - - - M D P S G M M N E G G P F N L A E I W Q F P L N G V S T A G D S S R R S F V G P N Q F G D A D L T T A A N G D P A
pt041726_POPTR_    M I R M D P P A M M N E G G P Y T L E E I W Q F P I N G - - - - - - - - - - - - S G R G Q F E L L N L E R R A - - - - -
pt034245_POPTR_    - - - M D P P A R M N E G G P Y S L E E I W Q F P I N G - - - - - - - - - - - - S G R G H F D L L N L E Q R A - - - - -
pt034244_POPTR_    - - - M D P P A R M N E G G P Y S L E E I W Q F P I N G - - - - - - - - - - - - S G R G H F D L L N L E Q R A - - - - -
 
AT1G59640.1     R M S H A L S Q A V I E G I S G A W K R R E - - - - - D E S K S A K I V S - - - - - - - - - T I G - - - - - - - - - - -
pt041726_POPTR_    - - - - - - - - - - - - - A A S A R K R R E V D L D V D D S S S S K P T T L S P T N A N T N T N G L L N D C D G K R L K
pt034245_POPTR_    - - - - - - - - - - - - - A A S V R K H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt034244_POPTR_    - - - - - - - - - - - - - A A S V R K R R D V D L D V D D D S S S K P T - - - - - - - - - - T N G L L - - - - - - R L K
 
AT1G59640.1     - - A S E G E N K R - - - Q K I D E V C D G K A E A E - S L G T E T E Q K K Q Q M E P T K - D Y I H V R A R R G Q A T D
pt041726_POPTR_    A W G S R D D N H H H Q Q Q Q Q Q Q Q H D S R S E A E P S S G K L V E H K P Q P P E P P K Q D Y I H V R A R R G Q A T D
pt034245_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - E A E P S S G K H V E H K T Q P P E P S K Q D Y I H V R A R R G Q A T D
pt034244_POPTR_    T S G S K D E D H H - - - - - - - R H H D S K D E A E P S S G K H V E H K T Q P P E P S K Q D Y I H V R A R R G Q A T D
 
AT1G59640.1     S H S L A E R A R R E K I S E R M K I L Q D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A
pt041726_POPTR_    S H S L A E R A R R E K I S E R M K I L Q D I V P G C N K V T G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A
pt034245_POPTR_    S H S L A E R A R R E K I S E R M K I L Q D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A
pt034244_POPTR_    S H S L A E R A R R E K I S E R M K I L Q D L V P G C N K V I G K A L V L D E I I N Y I Q S L Q R Q V E F L S M K L E A
 
AT1G59640.1     V N S R M N P G I E V F P P K E F G Q Q A F E N P E I Q F G S Q S T R E Y S R G A S P E W L H M Q I G S G G F E R T S
pt041726_POPTR_    V N L N M N P E T E V F P S K D F G Q H T F D T A G M A F G S Q A T R E Y N H C T S P E W L H M Q V G - G G F Q R T S
pt034245_POPTR_    V N T R M N P G I E V F A S K D F G Q - T F D T A G M A F G S Q A T R E Y S R G T S P E W L H M Q V G - G G F E R T S
pt034244_POPTR_    V N T R M N P G I E V F A S K D F G Q - T F D T A G M A F G S Q A T R E Y S R G T S P E W L H M Q V G - G G F E R T S
 
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