fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G61110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019368 not found in 351aa AT1G61110.1 not_1st 0.550247116 II
Pt006392 not found in 241aa AT1G61110.1 not_1st 0.406919275 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G61110.1     ------------------MENMGDSSIGPGHPHLPPGFRFHPTDEELVVHYLKKKADSVP
pt006392_POPTR_ MGGRWGGCSITKKQSLFNMEAKASSGI-----QLPPGFRFHPSDEELIVHYLKNRVSSSP
pt019368_POPTR_ ------------------MEGTNSSSRSQ-HPQLPPGFRFHPTDEELVVHYLKKKAASVP
                                  **   .*.      :*********:****:*****::. * *

AT1G61110.1     LPVSIIAEIDLYKFDPWELPSKASFGEHEWYFFSPRDRKYPNGVRPNRAATSGYWKATGT
pt006392_POPTR_ LPASIIAEIDLYKYNPWELPKKALFGVDEWYFFTPRDRKYPNGARPNRAAASGYWKATGT
pt019368_POPTR_ LPVTIIAEIDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGT
                **.:*********::*****.** ** .*****:*********.******:*********

AT1G61110.1     DKPIFTCN-SHKVGVKKALVFYGGKPPKGIKTDWIMHEYRLTD----GNLSTAAKPP--D
pt006392_POPTR_ DKSIFNSFGTAKIGVKKTLVFYEGRPPKGLKTDWNMHEYRLLDAMIWNN-----------
pt019368_POPTR_ DKPILTSNGAQKVGVKKALVFYGGKPPKGIKTNWIMHEYRLIE----NN--SSPKPPAAD
                **.*:..  : *:****:**** *:****:**:* ****** :    .*           

AT1G61110.1     LTTTRKNSLRLDDWVLCRIYKKNSSQRPTMERVLLREDLMEGMLSKSSANSSSTSVLDNN
pt006392_POPTR_ --SKRKGSMRLDDWVLCRVRQKNRNCFPPGKMLRTKADIEEDVV----------SIRNDG
pt019368_POPTR_ SANKKGGSLRLDDWVLCRIYKKNNSQRPMDQRD--KEDSMEGMF----------ATLQNS
                  ..: .*:*********: :** .  *  :    : *  *.:.          :  ::.

AT1G61110.1     DNNNNN---------------NEEHFFDGMVV--------------SSDK----------
pt006392_POPTR_ TDEN----------------------FSGT---------------DQSES----------
pt019368_POPTR_ SHQNPKPLSASKHTAYASLLVNEDTFFEGILTGDGMQNGSISQLPSSSSKPNMSMAPVSA
                 .:*                      *.*                 .*..          

AT1G61110.1     ------RSLCGQYRMGHEASGSSSFGSFLSSKRFHHTGDLNN-----DNYNVSFVSMLSE
pt006392_POPTR_ -------------------------------------GNFST------------------
pt019368_POPTR_ NTFTATRTL-PPHQYWNDATGSPVGLANSSGKRFH--GELNSGITGTQEDNTSFVSMLNQ
                                                     *::..                  

AT1G61110.1     IPQSSGF-HANGVMDTTSSLADHGVLRQAFQLPNMNWHS------
pt006392_POPTR_ ----------------------------------EQWNSPMQYQE
pt019368_POPTR_ LPQSTPLVHPSTLLD--------GVLRQPFQLSSLNWNS------
                                                   :*:*
BoxShade v3.31 C (beta, 970507) Output
AT1G61110.1     - - - - - - - - - - - - - - - - - - M E N M G D S S I G P G H P H L P P G F R F H P T D E E L V V H Y L K K K A D S V P
pt006392_POPTR_    M G G R W G G C S I T K K Q S L F N M E A K A S S G I - - - - - Q L P P G F R F H P S D E E L I V H Y L K N R V S S S P
pt019368_POPTR_    - - - - - - - - - - - - - - - - - - M E G T N S S S R S Q - H P Q L P P G F R F H P T D E E L V V H Y L K K K A A S V P
 
AT1G61110.1     L P V S I I A E I D L Y K F D P W E L P S K A S F G E H E W Y F F S P R D R K Y P N G V R P N R A A T S G Y W K A T G T
pt006392_POPTR_    L P A S I I A E I D L Y K Y N P W E L P K K A L F G V D E W Y F F T P R D R K Y P N G A R P N R A A A S G Y W K A T G T
pt019368_POPTR_    L P V T I I A E I D L Y K F D P W E L P S K A T F G E Q E W Y F F S P R D R K Y P N G A R P N R A A T S G Y W K A T G T
 
AT1G61110.1     D K P I F T C N - S H K V G V K K A L V F Y G G K P P K G I K T D W I M H E Y R L T D - - - - G N L S T A A K P P - - D
pt006392_POPTR_    D K S I F N S F G T A K I G V K K T L V F Y E G R P P K G L K T D W N M H E Y R L L D A M I W N N - - - - - - - - - - -
pt019368_POPTR_    D K P I L T S N G A Q K V G V K K A L V F Y G G K P P K G I K T N W I M H E Y R L I E - - - - N N - - S S P K P P A A D
 
AT1G61110.1     L T T T R K N S L R L D D W V L C R I Y K K N S S Q R P T M E R V L L R E D L M E G M L S K S S A N S S S T S V L D N N
pt006392_POPTR_    - - S K R K G S M R L D D W V L C R V R Q K N R N C F P P G K M L R T K A D I E E D V V - - - - - - - - - - S I R N D G
pt019368_POPTR_    S A N K K G G S L R L D D W V L C R I Y K K N N S Q R P M D Q R D - - K E D S M E G M F - - - - - - - - - - A T L Q N S
 
AT1G61110.1     D N N N N N - - - - - - - - - - - - - - - N E E H F F D G M V V - - - - - - - - - - - - - - S S D K - - - - - - - - - -
pt006392_POPTR_    T D E N - - - - - - - - - - - - - - - - - - - - - - F S G T - - - - - - - - - - - - - - - D Q S E S - - - - - - - - - -
pt019368_POPTR_    S H Q N P K P L S A S K H T A Y A S L L V N E D T F F E G I L T G D G M Q N G S I S Q L P S S S S K P N M S M A P V S A
 
AT1G61110.1     - - - - - - R S L C G Q Y R M G H E A S G S S S F G S F L S S K R F H H T G D L N N - - - - - D N Y N V S F V S M L S E
pt006392_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G N F S T - - - - - - - - - - - - - - - - - -
pt019368_POPTR_    N T F T A T R T L - P P H Q Y W N D A T G S P V G L A N S S G K R F H - - G E L N S G I T G T Q E D N T S F V S M L N Q
 
AT1G61110.1     I P Q S S G F - H A N G V M D T T S S L A D H G V L R Q A F Q L P N M N W H S - - - - - -
pt006392_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E Q W N S P M Q Y Q E
pt019368_POPTR_    L P Q S T P L V H P S T L L D - - - - - - - - G V L R Q P F Q L S S L N W N S - - - - - -
 
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