fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G61660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015273 QQFLSNLGLELLSSPT in 155/411 AT1G61660.1 1st_1st 0.226308345 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G61660.1     MAEEFK--------ATASICGGGGGAWWNSPRSVMSPSDHFLSPCFGAAITSNDFSSQEN
Sb015273_Sorbi1 MADHQEMIHPPAAATTGSTGHGHGGDWWTTAVSC-SPDQ--LSAGFGAA----GWSSAEG
                **:. :        :*.*   * ** **.:. *  **.:  **. ****    .:** *.

AT1G61660.1     HLKSRMTCTDNNNIVFGQREADSDS---------GGSTVTMDSTLQMM---GL-------
Sb015273_Sorbi1 NNKSRS----------GNAAASSESPGSNHSLATGGSSITFQDNAGAVADHGVVAVPSHP
                : ***           *:  *.*:*         ***::*::..   :   *:       

AT1G61660.1     ----GFSSNCSSDWNQTILQEDL--------------NSSFIRSSQDQDHGQGFLSTTTS
Sb015273_Sorbi1 AVSGGLTASC---WNQPSYYFDQAHHVGLRSPSSNHNNSLMLQDAHDPN--QQFLSN---
                    *:::.*   ***.    *               ** :::.::* :  * ***.   

AT1G61660.1     PYILNPACSSSPSTSS----SSSLIRTFYDPEPSPYNFVSTTSGSINDPQ-LSWANKTNP
Sb015273_Sorbi1 ---LGLELLSSPTSSSGGFRTSSLLRSLTEP--------SAAAAKTSSPGFMQQYHQQQT
                   *.    ***::**    :***:*:: :*        *:::.. ..*  :.  :: :.

AT1G61660.1     HHQVAYGLINSFSNNANSRPFWNSSS---------TTNL----NNTTPSNFVTTPQIIST
Sb015273_Sorbi1 MNQVPAGSIREALQFSNSTPFWNPSAGSFASAAEGATSLLPPSGKSRPANFG-----VKS
                 :**. * *..  : :** ****.*:         :*.*    .:: *:**      :.:

AT1G61660.1     RLEDKTKNLKTRAQSESLKRAKDNESAA----KKPRVTTPSPLPTFKVRKENLRDQITSL
Sb015273_Sorbi1 ALDEGA------GDSSNIIAKRTNTAPTPPPLKKSRTGTPSPLPTFKVRKEKLGDRITAL
                 *:: :      .:*..:   : * :.:    **.*. *************:* *:**:*

AT1G61660.1     QQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDEN
Sb015273_Sorbi1 QQLVSPFGKTDTASVLHETIEYIKFLHEQVGSLSAPYLK------NRQQVPHHKVLRDGG
                ****************:*:********:**  **:**:*      ::**:. :.  :* .

AT1G61660.1     E----NHELRGHGLCLVPISSTFPVANETTADFWTPTFGGNNFR
Sb015273_Sorbi1 EAAAANGELTGRGLCLVPISSTFAVASETPLDFWTPFGGPAAFR
                *    * ** *:***********.**.**. *****  *   **
BoxShade v3.31 C (beta, 970507) Output
AT1G61660.1     M A E E F K - - - - - - - - A T A S I C G G G G G A W W N S P R S V M S P S D H F L S P C F G A A I T S N D F S S Q E N
Sb015273_Sorbi1    M A D H Q E M I H P P A A A T T G S T G H G H G G D W W T T A V S C - S P D Q - - L S A G F G A A - - - - G W S S A E G
 
AT1G61660.1     H L K S R M T C T D N N N I V F G Q R E A D S D S - - - - - - - - - G G S T V T M D S T L Q M M - - - G L - - - - - - -
Sb015273_Sorbi1    N N K S R S - - - - - - - - - - G N A A A S S E S P G S N H S L A T G G S S I T F Q D N A G A V A D H G V V A V P S H P
 
AT1G61660.1     - - - - G F S S N C S S D W N Q T I L Q E D L - - - - - - - - - - - - - - N S S F I R S S Q D Q D H G Q G F L S T T T S
Sb015273_Sorbi1    A V S G G L T A S C - - - W N Q P S Y Y F D Q A H H V G L R S P S S N H N N S L M L Q D A H D P N - - Q Q F L S N - - -
 
AT1G61660.1     P Y I L N P A C S S S P S T S S - - - - S S S L I R T F Y D P E P S P Y N F V S T T S G S I N D P Q - L S W A N K T N P
Sb015273_Sorbi1    - - - L G L E L L S S P T S S S G G F R T S S L L R S L T E P - - - - - - - - S A A A A K T S S P G F M Q Q Y H Q Q Q T
 
AT1G61660.1     H H Q V A Y G L I N S F S N N A N S R P F W N S S S - - - - - - - - - T T N L - - - - N N T T P S N F V T T P Q I I S T
Sb015273_Sorbi1    M N Q V P A G S I R E A L Q F S N S T P F W N P S A G S F A S A A E G A T S L L P P S G K S R P A N F G - - - - - V K S
 
AT1G61660.1     R L E D K T K N L K T R A Q S E S L K R A K D N E S A A - - - - K K P R V T T P S P L P T F K V R K E N L R D Q I T S L
Sb015273_Sorbi1    A L D E G A - - - - - - G D S S N I I A K R T N T A P T P P P L K K S R T G T P S P L P T F K V R K E K L G D R I T A L
 
AT1G61660.1     Q Q L V S P F G K T D T A S V L Q E A I E Y I K F L H D Q V T V L S T P Y M K Q G A S N Q Q Q Q Q I S G K S K S Q D E N
Sb015273_Sorbi1    Q Q L V S P F G K T D T A S V L H E T I E Y I K F L H E Q V G S L S A P Y L K - - - - - - N R Q Q V P H H K V L R D G G
 
AT1G61660.1     E - - - - N H E L R G H G L C L V P I S S T F P V A N E T T A D F W T P T F G G N N F R
Sb015273_Sorbi1    E A A A A N G E L T G R G L C L V P I S S T F A V A S E T P L D F W T P F G G P A A F R
 
0