fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G62700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031036 not found in 356aa AT1G12260.1 1st_not 0.556818181 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G62700.1     MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGN
pt031036_POPTR_ MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKRIDLDVIKDVDLYKIEPWDLQELCKLGT
                **:**:****************************::*:*********** *******:*.

AT1G62700.1     EEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYIRHSLIGMRKTLVFYKGRA
pt031036_POPTR_ EDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSRHSLVGMRKTLVFYKGRA
                *:*.************************************* ****:*************

AT1G62700.1     PNGQKSDWIMHEYRLETSENGTPQEEGWVVCRVFKKKLAATVRKMGDYHSSPSQHWYDDQ
pt031036_POPTR_ PNGQKSDWIMHEYRLETNENGIPQAKGWVVCRVFKKRM-PTMRKVGDY-DSPC--WYDDQ
                *****************.*** ** :**********:: .*:**:*** .**.  *****

AT1G62700.1     LSFMASEIISSSPRQ----FLPNHHYNRHHHQQTLPCGLNAFNNNNPNLQCKQELELHYN
pt031036_POPTR_ VSFM-PEI--DSPRRISQPYAPYHH---HYH-------------------CKQELELQYN
                :*** .**  .***:    : * **   *:*                   *******:**

AT1G62700.1     QMVQHQQQNHHLRESMFLQLPQLESP-------TSNCNS------DNNNNTRNISNLQKS
pt031036_POPTR_ -----------MPHDPFLQLPQLESPKVPQSAATASCNSVIAYGFDRTN-----GNTLQS
                           : .. **********       *:.***      *..*     .*  :*

AT1G62700.1     SNISHEEQLQQGN-QSFSSLYYDQGVEQ---MTTDWRVLDKFVASQLSNDEEAAAVVSSS
pt031036_POPTR_ STLTQEEKMQQCHQQNLNSLHNNNNSEQAVDQVTDWRVLDKFVASQLSHED-------AS
                *.:::**::** : *.:.**: ::. **    .***************:::       :*

AT1G62700.1     SHQNNVKIDTRNTGYHVIDEGINLPENDSERVVEMGEEYSNAHAASTSSSCQIDL--
pt031036_POPTR_ KGTNNFS----STATFNAAEQMNMLANESKR-SEIAQQY----ASTSTSSCQIDLWK
                .  **..    .*. .   * :*:  *:*:*  *:.::*    *::::*******
BoxShade v3.31 C (beta, 970507) Output
AT1G62700.1     M N S F S Q V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I E I D I I K D V D L Y K I E P C D L Q E L C K I G N
pt031036_POPTR_    M N T F S H V P P G F R F H P T D E E L V D Y Y L R K K V A S K R I D L D V I K D V D L Y K I E P W D L Q E L C K L G T
 
AT1G62700.1     E E Q S E W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y I R H S L I G M R K T L V F Y K G R A
pt031036_POPTR_    E D Q N E W Y F F S H K D K K Y P T G T R T N R A T K A G F W K A T G R D K A I Y S R H S L V G M R K T L V F Y K G R A
 
AT1G62700.1     P N G Q K S D W I M H E Y R L E T S E N G T P Q E E G W V V C R V F K K K L A A T V R K M G D Y H S S P S Q H W Y D D Q
pt031036_POPTR_    P N G Q K S D W I M H E Y R L E T N E N G I P Q A K G W V V C R V F K K R M - P T M R K V G D Y - D S P C - - W Y D D Q
 
AT1G62700.1     L S F M A S E I I S S S P R Q - - - - F L P N H H Y N R H H H Q Q T L P C G L N A F N N N N P N L Q C K Q E L E L H Y N
pt031036_POPTR_    V S F M - P E I - - D S P R R I S Q P Y A P Y H H - - - H Y H - - - - - - - - - - - - - - - - - - - C K Q E L E L Q Y N
 
AT1G62700.1     Q M V Q H Q Q Q N H H L R E S M F L Q L P Q L E S P - - - - - - - T S N C N S - - - - - - D N N N N T R N I S N L Q K S
pt031036_POPTR_    - - - - - - - - - - - M P H D P F L Q L P Q L E S P K V P Q S A A T A S C N S V I A Y G F D R T N - - - - - G N T L Q S
 
AT1G62700.1     S N I S H E E Q L Q Q G N - Q S F S S L Y Y D Q G V E Q - - - M T T D W R V L D K F V A S Q L S N D E E A A A V V S S S
pt031036_POPTR_    S T L T Q E E K M Q Q C H Q Q N L N S L H N N N N S E Q A V D Q V T D W R V L D K F V A S Q L S H E D - - - - - - - A S
 
AT1G62700.1     S H Q N N V K I D T R N T G Y H V I D E G I N L P E N D S E R V V E M G E E Y S N A H A A S T S S S C Q I D L - -
pt031036_POPTR_    K G T N N F S - - - - S T A T F N A A E Q M N M L A N E S K R - S E I A Q Q Y - - - - A S T S T S S C Q I D L W K
 
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