fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G62975.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029720 not found in 241aa AT1G62975.1 1st_1st 0.295964125 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G62975.1     MDCVPSLFMPDSTYEDGLL--FS-----------DSFLLSPFISYQNNDVFHSITNKIGG
pt029720_POPTR_ MDYISSVFQIDYNSTDDLVQYFSSFPTQQQTTPKDKVPLRPY------EDCHDLANKTQH
                ** :.*:*  * .  *.*:  **           *.. * *:      :  *.::**   

AT1G62975.1     SNKKRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQG
pt029720_POPTR_ GRRRKS--PIALGSVK-DENPNDNKKKKIIHRDIERQRRQEMANLYGSLRCLLPLKYLKG
                ..:::*   *: *: : ::* :*.:.**: ***********::.*:  ** ***::*::*

AT1G62975.1     KRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAAST
pt029720_POPTR_ KRSTSDHIHQTVYYIKHQEEKIQKLIDKKDELKRYLS----TSSALE----NLEGCERDT
                ******** *:* ***. : **::* :*::.:*: :*    * **:*    .*...  .*

AT1G62975.1     LSSSCSCVGDKHITVVVTPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSA
pt029720_POPTR_ LTVRTRC--------------VGVEVDINTALKKGFP-LSRVLAILIEEG-FSVVSCIST
                *:    *              ****: *. .* :. . ** ** :* :*  ******:*:

AT1G62975.1     RRQQRFMHTIVSQVEDGKQINILELKDKIMTM--
pt029720_POPTR_ KVNERMLHNIISEVTDGRSLDISELQQKLTSAIV
                : ::*::*.*:*:* **:.::* **::*: :
BoxShade v3.31 C (beta, 970507) Output
AT1G62975.1     M D C V P S L F M P D S T Y E D G L L - - F S - - - - - - - - - - - D S F L L S P F I S Y Q N N D V F H S I T N K I G G
pt029720_POPTR_    M D Y I S S V F Q I D Y N S T D D L V Q Y F S S F P T Q Q Q T T P K D K V P L R P Y - - - - - - E D C H D L A N K T Q H
 
AT1G62975.1     S N K K R S L C D I T Y G A N E A N K N D D D R E S K K M K H R D I E R Q R R Q E V S S L F K R L R T L L P F Q Y I Q G
pt029720_POPTR_    G R R R K S - - P I A L G S V K - D E N P N D N K K K K I I H R D I E R Q R R Q E M A N L Y G S L R C L L P L K Y L K G
 
AT1G62975.1     K R S T S D H I V Q A V N Y I K D L Q I K I K E L N E K R N R V K K V I S A T T T T H S A I E E C T S S L S S S A A S T
pt029720_POPTR_    K R S T S D H I H Q T V Y Y I K H Q E E K I Q K L I D K K D E L K R Y L S - - - - T S S A L E - - - - N L E G C E R D T
 
AT1G62975.1     L S S S C S C V G D K H I T V V V T P C L V G V E I I I S C C L G R N K S C L S S V L Q M L A Q E Q R F S V V S C L S A
pt029720_POPTR_    L T V R T R C - - - - - - - - - - - - - - V G V E V D I N T A L K K G F P - L S R V L A I L I E E G - F S V V S C I S T
 
AT1G62975.1     R R Q Q R F M H T I V S Q V E D G K Q I N I L E L K D K I M T M - -
pt029720_POPTR_    K V N E R M L H N I I S E V T D G R S L D I S E L Q Q K L T S A I V
 
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