fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G62990.1 ERVRQELKLELKQGFK at 193/291 in AT1G62990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028672 not found in 301aa AT1G62990.1 1st_1st 0.776470588 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G62990.1     MQEAALGMMGATVGG------DGDTAV--VAEQNRQLKGEIATHPMYEQLLAAHVACLRV
pt028672_POPTR_ MQEPNLGMMGSGSGGALGGLSSGEMSVSLSGDQSRQLKAEIATHPLYEQLLSAHVSCLRV
                ***. *****:  **      .*: :*   .:*.****.******:*****:***:****

AT1G62990.1     ATPIDQLPIIEAQLSQSHHLLRSYASTAVGYH---------HDRHELDNFLAQYVMVLCS
pt028672_POPTR_ ATPIDQLPLIDAQLSQSHHLLRSYASQ----HNQHGHSLSPHERQDLDNFLAQYLIILCT
                ********:*:***************     *         *:*::********:::**:

AT1G62990.1     FKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSG
pt028672_POPTR_ FKDQLQQHVRVHAVEAVMACREIETTLQALTGVTLGEGTGATMSDDEDDLQMDFSLDQSS
                **:*********************..*::***.*****:*****:***** **** *:*.

AT1G62990.1     VDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKL
pt028672_POPTR_ AD---GHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKL
                .*   **** ***********************:*****************:********

AT1G62990.1     PGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLT
pt028672_POPTR_ PGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVT
                *****:*********.*************************************.**:*:*

AT1G62990.1     SLKSKRKH
pt028672_POPTR_ SLKSKRKR
                *******:
BoxShade v3.31 C (beta, 970507) Output
AT1G62990.1     M Q E A A L G M M G A T V G G - - - - - - D G D T A V - - V A E Q N R Q L K G E I A T H P M Y E Q L L A A H V A C L R V
pt028672_POPTR_    M Q E P N L G M M G S G S G G A L G G L S S G E M S V S L S G D Q S R Q L K A E I A T H P L Y E Q L L S A H V S C L R V
 
AT1G62990.1     A T P I D Q L P I I E A Q L S Q S H H L L R S Y A S T A V G Y H - - - - - - - - - H D R H E L D N F L A Q Y V M V L C S
pt028672_POPTR_    A T P I D Q L P L I D A Q L S Q S H H L L R S Y A S Q - - - - H N Q H G H S L S P H E R Q D L D N F L A Q Y L I I L C T
 
AT1G62990.1     F K E Q L Q Q H V R V H A V E A V M A C R E I E N N L H S L T G A T L G E G S G A T M S E D E D D L P M D F S S D N S G
pt028672_POPTR_    F K D Q L Q Q H V R V H A V E A V M A C R E I E T T L Q A L T G V T L G E G T G A T M S D D E D D L Q M D F S L D Q S S
 
AT1G62990.1     V D F S G G H D M T G F G P L L P T E S E R S L M E R V R Q E L K L E L K Q G F K S R I E D V R E E I M R K R R A G K L
pt028672_POPTR_    A D - - - G H D M M G F G P L L P T E S E R S L M E R V R Q E L K I E L K Q G F K S R I E D V R E E I L R K R R A G K L
 
AT1G62990.1     P G D T T T V L K N W W Q Q H C K W P Y P T E D D K A K L V E E T G L Q L K Q I N N W F I N Q R K R N W H N N S H S L T
pt028672_POPTR_    P G D T T S V L K N W W Q Q H S K W P Y P T E D D K A K L V E E T G L Q L K Q I N N W F I N Q R K R N W H S N S Q S V T
 
AT1G62990.1     S L K S K R K H
pt028672_POPTR_    S L K S K R K R
 
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