fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G63030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029739 not found in 213aa AT4G25480.1 1st_not 0.522788203 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G63030.1     MEND---------------------DITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGD
pt029739_POPTR_ MPNDRQEASSFSDSSTSRRVVHSDEEVLLATSFPKKRAGRRIFRETRHPVFRGVRKRNGN
                * **                     :: :*   **********:*****::****:*:*:

AT1G63030.1     KWVCEVREPIHQRRVWLGTYPTADMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTD
pt029739_POPTR_ KWVCEMREPNKKSRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLPVPVSKD
                *****:*** :: *:*******.:*********.*****:******:*********.*.*

AT1G63030.1     PDTIRRTAAEAAEMFRPPEF-----------STGITVLPSASE--FDTSDEGVAGMMMRL
pt029739_POPTR_ SKDITRAANEAAELFRPQEFGGHPAKQQDSNAEAVFAMPGENDVFFEEAVFDMPGLLVDM
                .. * *:* ****:*** **           : .: .:*. .:  *: :  .:.*::: :

AT1G63030.1     AEEPLMSPPRSYI--DMNTSVYVDEEMCYEDLSLWSY
pt029739_POPTR_ AEGLLLSPPR-YVRNDCND---LDHMENGSDLSLWSY
                **  *:**** *:  * *    :*.    .*******
BoxShade v3.31 C (beta, 970507) Output
AT1G63030.1     M E N D - - - - - - - - - - - - - - - - - - - - - D I T V A E M K P K K R A G R R I F K E T R H P I Y R G V R R R D G D
pt029739_POPTR_    M P N D R Q E A S S F S D S S T S R R V V H S D E E V L L A T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N
 
AT1G63030.1     K W V C E V R E P I H Q R R V W L G T Y P T A D M A A R A H D V A V L A L R G R S A C L N F S D S A W R L P V P A S T D
pt029739_POPTR_    K W V C E M R E P N K K S R I W L G T Y P T P E M A A R A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D
 
AT1G63030.1     P D T I R R T A A E A A E M F R P P E F - - - - - - - - - - - S T G I T V L P S A S E - - F D T S D E G V A G M M M R L
pt029739_POPTR_    S K D I T R A A N E A A E L F R P Q E F G G H P A K Q Q D S N A E A V F A M P G E N D V F F E E A V F D M P G L L V D M
 
AT1G63030.1     A E E P L M S P P R S Y I - - D M N T S V Y V D E E M C Y E D L S L W S Y
pt029739_POPTR_    A E G L L L S P P R - Y V R N D C N D - - - L D H M E N G S D L S L W S Y
 
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