fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G63030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026202 not found in 248aa AT5G51990.1 not_not 0.514745308 III
Pt029157 not found in 231aa AT4G25490.1 not_not 0.493297587 III
Pt023286 not found in 255aa AT5G51990.1 not_not 0.479892761 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G63030.1     ---------------------------------------------------------MEN
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNFSD
pt026202_POPTR_ MDVFCSYSDQNPIGSMSLLSVLDE------QECSYSSVLSDSSITSSVTKGVQPGAIFSD
pt029157_POPTR_ ----------MVMGGSNSFS-------PDKQESSLSSLLSDSS-------GSQQDSPSSN
                                                                          .:

AT1G63030.1     DDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTAD
pt023286_POPTR_ EEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAE
pt026202_POPTR_ EEVILASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAD
pt029157_POPTR_ EKVLLATSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPTPE
                :.: :*  .*******: *:*****::****:*:..*****:*** :: *:****:**.:

AT1G63030.1     MAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEF----
pt023286_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVG--
pt026202_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSLG--
pt029157_POPTR_ MAARAHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTSDLGGQV
                *********.**:**:******:*******.* *.:.. *:::*:***  **.       

AT1G63030.1     --------------STG--ITVLPS--------ASEFDTSDEGVAGMMMRLAEEPLMSPP
pt023286_POPTR_ GELMRTGDEGEKAAETT----AEAGEEVFYMDDEAVFG-----MPGLLANMAEGMLLPPP
pt026202_POPTR_ VELTRTGDEVEKVAGT-------AAGDVFYMDDDADFG-----MPGLLANIAEGMLLPPP
pt029157_POPTR_ MEDFRREDRGEVRSSTNDDIRDLPSENVGYIDEEAEFN-----MPGLLASMAEGLLLSPP
                               *       ..         : *.     :.*::  :**  *:.**

AT1G63030.1     RSYIDMNTSVYVDEEMCYEDLSLWSY--
pt023286_POPTR_ HCGG--GGDGWDNMENIDADMPLWSFSI
pt026202_POPTR_ NCCGYSGGDSLDNMENNDTDMSLWSFSV
pt029157_POPTR_ HYTGDWN-----DGEI-DADWSLWSS--
                .     .     : *    * .***
BoxShade v3.31 C (beta, 970507) Output
AT1G63030.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E N
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F S D
pt026202_POPTR_    M D V F C S Y S D Q N P I G S M S L L S V L D E - - - - - - Q E C S Y S S V L S D S S I T S S V T K G V Q P G A I F S D
pt029157_POPTR_    - - - - - - - - - - M V M G G S N S F S - - - - - - - P D K Q E S S L S S L L S D S S - - - - - - - G S Q Q D S P S S N
 
AT1G63030.1     D D I T V A E M K P K K R A G R R I F K E T R H P I Y R G V R R R D G D K W V C E V R E P I H Q R R V W L G T Y P T A D
pt023286_POPTR_    E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A E
pt026202_POPTR_    E E V I L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A D
pt029157_POPTR_    E K V L L A T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T P E
 
AT1G63030.1     M A A R A H D V A V L A L R G R S A C L N F S D S A W R L P V P A S T D P D T I R R T A A E A A E M F R P P E F - - - -
pt023286_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G - -
pt026202_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P T P A S S D A K D I Q K A A A E A A E A F R P E G S L G - -
pt029157_POPTR_    M A A R A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S D L G G Q V
 
AT1G63030.1     - - - - - - - - - - - - - - S T G - - I T V L P S - - - - - - - - A S E F D T S D E G V A G M M M R L A E E P L M S P P
pt023286_POPTR_    G E L M R T G D E G E K A A E T T - - - - A E A G E E V F Y M D D E A V F G - - - - - M P G L L A N M A E G M L L P P P
pt026202_POPTR_    V E L T R T G D E V E K V A G T - - - - - - - A A G D V F Y M D D D A D F G - - - - - M P G L L A N I A E G M L L P P P
pt029157_POPTR_    M E D F R R E D R G E V R S S T N D D I R D L P S E N V G Y I D E E A E F N - - - - - M P G L L A S M A E G L L L S P P
 
AT1G63030.1     R S Y I D M N T S V Y V D E E M C Y E D L S L W S Y - -
pt023286_POPTR_    H C G G - - G G D G W D N M E N I D A D M P L W S F S I
pt026202_POPTR_    N C C G Y S G G D S L D N M E N N D T D M S L W S F S V
pt029157_POPTR_    H Y T G D W N - - - - - D G E I - D A D W S L W S S - -
 
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