fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G63030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029739 not found in 213aa AT4G25480.1 1st_not 0.522788203 II
Pt026202 not found in 248aa AT5G51990.1 not_not 0.514745308 III
Pt029157 not found in 231aa AT4G25490.1 not_not 0.493297587 III
Pt023286 not found in 255aa AT5G51990.1 not_not 0.479892761 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G63030.1     ------------------------------ME---------------------------N
pt029739_POPTR_ --------------------MPND-----RQE---ASSFSDSSTSRR--------VVHSD
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNFSD
pt029157_POPTR_ ----------MVMGGSN--SFSPD-----KQESSLSSLLSDSSGSQQ-------DSPSSN
pt026202_POPTR_ MDVFCSYSDQNPIGSMSLLSVLDE------QECSYSSVLSDSSITSSVTKGVQPGAIFSD
                                               :                           :

AT1G63030.1     DDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTAD
pt029739_POPTR_ EEVLLATSFPKKRAGRRIFRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTPE
pt023286_POPTR_ EEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAE
pt029157_POPTR_ EKVLLATSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPTPE
pt026202_POPTR_ EEVILASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAD
                :.: :*   *******: *:*****::****:*:..*****:*** :: *:****:**.:

AT1G63030.1     MAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEF----
pt029739_POPTR_ MAARAHDVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRPQEFGGHP
pt023286_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVGGE
pt029157_POPTR_ MAARAHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTSDLGGQV
pt026202_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSLGVE
                *********.**:**:******:*******.* *.:.. * ::* ***  **.       

AT1G63030.1     --------------STG--ITVLPSASEFDTSDEG---VAGMMMRLAEEPLMSPPR--SY
pt029739_POPTR_ A---KQQD------SNAEAVFAMPGENDVFF-EEAVFDMPGLLVDMAEGLLLSPPR---Y
pt023286_POPTR_ L--MRTGDEGEKAAETT----AEAGEEVFYMDDEAVFGMPGLLANMAEGMLLPPPHCGG-
pt029157_POPTR_ MEDFRREDRGEVRSSTNDDIRDLPSENVGYIDEEAEFNMPGLLASMAEGLLLSPPH---Y
pt026202_POPTR_ L--TRTGDEVEKVAGT-------AAGDVFYMDDDADFGMPGLLANIAEGMLLPPPNCCGY
                               .       .. .     ::.   :.*::  :**  *:.**.    

AT1G63030.1     I--DMNTSVYVDEEMCYEDLSLWSY--
pt029739_POPTR_ VRNDCNDL---DHMENGSDLSLWSY--
pt023286_POPTR_ -GGDGWD----NMENIDADMPLWSFSI
pt029157_POPTR_ T-GDWND------GEIDADWSLWSS--
pt026202_POPTR_ SGGDSLD----NMENNDTDMSLWSFSV
                   *              * .***
BoxShade v3.31 C (beta, 970507) Output
AT1G63030.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - - - - - - - - - - - - - - - - - - - - - - - - - - N
pt029739_POPTR_    - - - - - - - - - - - - - - - - - - - - M P N D - - - - - R Q E - - - A S S F S D S S T S R R - - - - - - - - V V H S D
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F S D
pt029157_POPTR_    - - - - - - - - - - M V M G G S N - - S F S P D - - - - - K Q E S S L S S L L S D S S G S Q Q - - - - - - - D S P S S N
pt026202_POPTR_    M D V F C S Y S D Q N P I G S M S L L S V L D E - - - - - - Q E C S Y S S V L S D S S I T S S V T K G V Q P G A I F S D
 
AT1G63030.1     D D I T V A E M K P K K R A G R R I F K E T R H P I Y R G V R R R D G D K W V C E V R E P I H Q R R V W L G T Y P T A D
pt029739_POPTR_    E E V L L A T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P E
pt023286_POPTR_    E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A E
pt029157_POPTR_    E K V L L A T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T P E
pt026202_POPTR_    E E V I L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A D
 
AT1G63030.1     M A A R A H D V A V L A L R G R S A C L N F S D S A W R L P V P A S T D P D T I R R T A A E A A E M F R P P E F - - - -
pt029739_POPTR_    M A A R A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P Q E F G G H P
pt023286_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G G E
pt029157_POPTR_    M A A R A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S D L G G Q V
pt026202_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P T P A S S D A K D I Q K A A A E A A E A F R P E G S L G V E
 
AT1G63030.1     - - - - - - - - - - - - - - S T G - - I T V L P S A S E F D T S D E G - - - V A G M M M R L A E E P L M S P P R - - S Y
pt029739_POPTR_    A - - - K Q Q D - - - - - - S N A E A V F A M P G E N D V F F - E E A V F D M P G L L V D M A E G L L L S P P R - - - Y
pt023286_POPTR_    L - - M R T G D E G E K A A E T T - - - - A E A G E E V F Y M D D E A V F G M P G L L A N M A E G M L L P P P H C G G -
pt029157_POPTR_    M E D F R R E D R G E V R S S T N D D I R D L P S E N V G Y I D E E A E F N M P G L L A S M A E G L L L S P P H - - - Y
pt026202_POPTR_    L - - T R T G D E V E K V A G T - - - - - - - A A G D V F Y M D D D A D F G M P G L L A N I A E G M L L P P P N C C G Y
 
AT1G63030.1     I - - D M N T S V Y V D E E M C Y E D L S L W S Y - -
pt029739_POPTR_    V R N D C N D L - - - D H M E N G S D L S L W S Y - -
pt023286_POPTR_    - G G D G W D - - - - N M E N I D A D M P L W S F S I
pt029157_POPTR_    T - G D W N D - - - - - - G E I D A D W S L W S S - -
pt026202_POPTR_    S G G D S L D - - - - N M E N N D T D M S L W S F S V
 
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