fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G63030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb014468 not found in 227aa AT5G51990.1 1st_not 0.423592493 II
Sb011043 not found in 228aa AT5G51990.1 not_not 0.404825737 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G63030.1     --------------------------MENDD-------ITVAEMKPKKRAGRRIFKETRH
Sb014468_Sorbi1 MDWAYYGISGYST-TPSPPPVGVGGGVGDED----EAYMTVSSAPPKRRAGRTKFKETRH
Sb011043_Sorbi1 MDAASF--SDYSSGTPSPVG-GVSGGVDGDDGGSSSSYMTVSSAPPKRRAGRTKFKETRH
                                          : .:*       :**:.  **:****  ******

AT1G63030.1     PIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTADMAARAHDVAVLALRGRSACLNFSD
Sb014468_Sorbi1 PVYKGVRSRNPGRWVCEVREPHGRQRIWLGTFETAEMAARAHDVAALALRGRAACLNFAD
Sb011043_Sorbi1 PVYKGVRRRNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAALALRGRAACLNFAD
                *:*:*** *: .:********  ::*:****: **:*********.******:*****:*

AT1G63030.1     SAWRLPVPA-STDPDTIRRTAAEAAEMFRPP----------EFSTGITVLPSASEF----
Sb014468_Sorbi1 SPRRLRVPAQGAGHDEIRRAAVEAAELFRPPQQQQHNVGGSEAAAAAVAAPCAQGSGGGG
Sb011043_Sorbi1 SPRLLRVPPMGSGHDEIRRAAAVAADQFRPAPDRQGNVATAEEAADTTPLDATTQS----
                *.  * **. .:. * ***:*. **: ***.          * ::  .   .:       

AT1G63030.1     -----------DTSDEGVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDEEMCYEDLSLWSY
Sb014468_Sorbi1 IGGDFAYYPMDDGLEFEMHG-YLDMAQGMLVDPP-----QATAWIEDEYEC--EVSLWSY
Sb011043_Sorbi1 -VVDDPYCIIDDRLDFGMQG-YLDMAQGMLIDPPP-MAGSSTSGGDDDDDG--EVKLWSY
                           *  :  : *  : :*:  *:.**       *:   *:     ::.****
BoxShade v3.31 C (beta, 970507) Output
AT1G63030.1     - - - - - - - - - - - - - - - - - - - - - - - - - - M E N D D - - - - - - - I T V A E M K P K K R A G R R I F K E T R H
Sb014468_Sorbi1    M D W A Y Y G I S G Y S T - T P S P P P V G V G G G V G D E D - - - - E A Y M T V S S A P P K R R A G R T K F K E T R H
Sb011043_Sorbi1    M D A A S F - - S D Y S S G T P S P V G - G V S G G V D G D D G G S S S S Y M T V S S A P P K R R A G R T K F K E T R H
 
AT1G63030.1     P I Y R G V R R R D G D K W V C E V R E P I H Q R R V W L G T Y P T A D M A A R A H D V A V L A L R G R S A C L N F S D
Sb014468_Sorbi1    P V Y K G V R S R N P G R W V C E V R E P H G R Q R I W L G T F E T A E M A A R A H D V A A L A L R G R A A C L N F A D
Sb011043_Sorbi1    P V Y K G V R R R N P G R W V C E V R E P H G K Q R I W L G T F E T A E M A A R A H D V A A L A L R G R A A C L N F A D
 
AT1G63030.1     S A W R L P V P A - S T D P D T I R R T A A E A A E M F R P P - - - - - - - - - - E F S T G I T V L P S A S E F - - - -
Sb014468_Sorbi1    S P R R L R V P A Q G A G H D E I R R A A V E A A E L F R P P Q Q Q Q H N V G G S E A A A A A V A A P C A Q G S G G G G
Sb011043_Sorbi1    S P R L L R V P P M G S G H D E I R R A A A V A A D Q F R P A P D R Q G N V A T A E E A A D T T P L D A T T Q S - - - -
 
AT1G63030.1     - - - - - - - - - - - D T S D E G V A G M M M R L A E E P L M S P P R S Y I D M N T S V Y V D E E M C Y E D L S L W S Y
Sb014468_Sorbi1    I G G D F A Y Y P M D D G L E F E M H G - Y L D M A Q G M L V D P P - - - - - Q A T A W I E D E Y E C - - E V S L W S Y
Sb011043_Sorbi1    - V V D D P Y C I I D D R L D F G M Q G - Y L D M A Q G M L I D P P P - M A G S S T S G G D D D D D G - - E V K L W S Y
 
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